HHsearch alignment for GI: peg_887 and conserved domain: COG4988

>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones].

Probab=91.98  E-value=0.2  Score=29.80  Aligned_cols=52  Identities=15%  Similarity=0.146  Sum_probs=36.1

Q ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHCC---CEE-------EECCHHHHHCCCCCCCCCCC
Q ss_conf             58984999987987334499999998819---879-------75004421168222423467
Q 537021.9.peg.8    7 STHTKAIFISGPTASGKSLCAVNLAHKFN---GAI-------INADSMQVYDTLRILTSRPS   58 (133)
Q Consensus         7 ~~~~~ii~I~GpTasGKT~lai~LA~~~~---~~I-------Is~DS~QvYk~l~IgTaKps   58 (133)
T Consensus       344 ~~~g~~talvG~SGaGKSTLl~lL~G~~~~~~G~I~vng~~l~~l~~~~~~k~i~~v~Q~p~  405 (559)
T COG4988         344 IKAGQLTALVGASGAGKSTLLNLLLGFLAPTQGEIRVNGIDLRDLSPEAWRKQISWVSQNPY  405 (559)
T ss_pred             ECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHEEEECCCCC
T ss_conf             54896799988999978999999847577778448889931000687788867246279984