HHsearch alignment for GI: peg_887 and conserved domain: PRK00091
>PRK00091 miaA tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed.
Probab=100.00 E-value=0 Score=301.74 Aligned_cols=113 Identities=33% Similarity=0.529 Sum_probs=108.6
Q ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHCCCEEEECCHHHHHCCCCCCCCCCCHHHHCCCEEEECCEECCCCCCCHHHHHHH
Q ss_conf 89849999879873344999999988198797500442116822242346768742340433144513765589999999
Q 537021.9.peg.8 8 THTKAIFISGPTASGKSLCAVNLAHKFNGAIINADSMQVYDTLRILTSRPSDQDMQSIPHYLYGYVPAQKSYSTGKWLRY 87 (133)
Q Consensus 8 ~~~~ii~I~GpTasGKT~lai~LA~~~~~~IIs~DS~QvYk~l~IgTaKps~~e~~~v~H~lid~~~~~e~~sv~~f~~~ 87 (133)
T Consensus 2 ~~~~ii~i~GpTasGKs~la~~la~~~~~eIIsaDS~QvYk~l~IgTakps~~e~~~i~Hhli~~~~~~e~~sv~~f~~~ 81 (304)
T PRK00091 2 MKPKLIVLVGPTASGKTALAIELAKRLNGEIISVDSMQVYRGMDIGTAKPTAEELAGVPHHLIDILDPTESYSAADFQRD 81 (304)
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHCCCEEEEECHHHHHCCCCEEECCCCHHHHCCCCCEEEEEECCCCCEEHHHHHHH
T ss_conf 99977999898865899999999998799899412688749998688999999981898124345658875449999999
Q ss_pred HHHHHHHHHHHHCHHHHHHHCCCEEEEECCCHHHHHHHHCCCC
Q ss_conf 9999999984100000133259855998893089999841843
Q 537021.9.peg.8 88 AIKKIAEVQKTVFTYNSRWDRSLFSCINRSTLYYARNTYCNKR 130 (133)
Q Consensus 88 a~~~i~~i~~~~~~~~~~~~r~~~piivGGTglY~~al~~~~~ 130 (133)
T Consensus 82 a~~~i~~i~~----------~~kiPIiVGGTglYl~aLl~g~~ 114 (304)
T PRK00091 82 ALAAIEDITA----------RGKLPILVGGTGLYFKALLEGLS 114 (304)
T ss_pred HHHHHHHHHH----------CCCCCEEECCCHHHHHHHHCCCC
T ss_conf 9999999997----------69987898083899999971877