HHsearch alignment for GI: peg_887 and conserved domain: PRK00635
>PRK00635 excinuclease ABC subunit A; Provisional.
Probab=94.87 E-value=0.017 Score=36.30 Aligned_cols=54 Identities=17% Similarity=0.246 Sum_probs=38.0
Q ss_pred CCCCEEEEECCCCCCHHHHHHHH----HHHCCCEEEECCHHHHHCCCCCCCCCCCHHHHCCC
Q ss_conf 89849999879873344999999----98819879750044211682224234676874234
Q 537021.9.peg.8 8 THTKAIFISGPTASGKSLCAVNL----AHKFNGAIINADSMQVYDTLRILTSRPSDQDMQSI 65 (133)
Q Consensus 8 ~~~~ii~I~GpTasGKT~lai~L----A~~~~~~IIs~DS~QvYk~l~IgTaKps~~e~~~v 65 (133)
T Consensus 24 P~~~lvViTGvSGSGKSSLAFDTiyAEgqRry~EslS~yaRqfl~~~~----kP~VD~I~GL 81 (1809)
T PRK00635 24 CPREIVLLTGVSGSGKSSLAFDTIYAAGRKRYISTLPSFFATTLSSLP----DPTVEKIHGL 81 (1809)
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC----CCCCCEECCC
T ss_conf 699889997998897899998999998988998762899983047999----9994966698