HHsearch alignment for GI: peg_887 and conserved domain: PRK00771
>PRK00771 signal recognition particle protein Srp54; Provisional.
Probab=92.86 E-value=0.19 Score=29.88 Aligned_cols=46 Identities=33% Similarity=0.447 Sum_probs=36.0
Q ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHC-----CCEEEECCHHHHHCCCCCCCCCCCHHHHCC
Q ss_conf 898499998798733449999999881-----987975004421168222423467687423
Q 537021.9.peg.8 8 THTKAIFISGPTASGKSLCAVNLAHKF-----NGAIINADSMQVYDTLRILTSRPSDQDMQS 64 (133)
Q Consensus 8 ~~~~ii~I~GpTasGKT~lai~LA~~~-----~~~IIs~DS~QvYk~l~IgTaKps~~e~~~ 64 (133)
T Consensus 95 ~kP~Vim~vGlqGsGKTTT~aKLA~~~kk~g~kv~lvaaD-----------t~RpaA~eQL~ 145 (433)
T PRK00771 95 LKPQTILLVGLQGSGKTTTAAKLARYFQKKGLKVGVICAD-----------TWRPGAYEQLK 145 (433)
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECC-----------CCCHHHHHHHH
T ss_conf 8985899973788978999999999999779946785067-----------88368999999