HHsearch alignment for GI: peg_887 and conserved domain: PRK00771

>PRK00771 signal recognition particle protein Srp54; Provisional.
Probab=92.86  E-value=0.19  Score=29.88  Aligned_cols=46  Identities=33%  Similarity=0.447  Sum_probs=36.0

Q ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHC-----CCEEEECCHHHHHCCCCCCCCCCCHHHHCC
Q ss_conf             898499998798733449999999881-----987975004421168222423467687423
Q 537021.9.peg.8    8 THTKAIFISGPTASGKSLCAVNLAHKF-----NGAIINADSMQVYDTLRILTSRPSDQDMQS   64 (133)
Q Consensus         8 ~~~~ii~I~GpTasGKT~lai~LA~~~-----~~~IIs~DS~QvYk~l~IgTaKps~~e~~~   64 (133)
T Consensus        95 ~kP~Vim~vGlqGsGKTTT~aKLA~~~kk~g~kv~lvaaD-----------t~RpaA~eQL~  145 (433)
T PRK00771         95 LKPQTILLVGLQGSGKTTTAAKLARYFQKKGLKVGVICAD-----------TWRPGAYEQLK  145 (433)
T ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECC-----------CCCHHHHHHHH
T ss_conf             8985899973788978999999999999779946785067-----------88368999999