HHsearch alignment for GI: peg_887 and conserved domain: PRK03731
>PRK03731 aroL shikimate kinase II; Reviewed.
Probab=96.96 E-value=0.0017 Score=42.28 Aligned_cols=81 Identities=12% Similarity=0.149 Sum_probs=50.8
Q ss_pred CCEEEEECCCCCCHHHHHHHHHHHCCCEEEECCHHHHHCCCCCCCCCCCHHHHCCCEEEECCEECCCCCCCHHHHHHHHH
Q ss_conf 84999987987334499999998819879750044211682224234676874234043314451376558999999999
Q 537021.9.peg.8 10 TKAIFISGPTASGKSLCAVNLAHKFNGAIINADSMQVYDTLRILTSRPSDQDMQSIPHYLYGYVPAQKSYSTGKWLRYAI 89 (133)
Q Consensus 10 ~~ii~I~GpTasGKT~lai~LA~~~~~~IIs~DS~QvYk~l~IgTaKps~~e~~~v~H~lid~~~~~e~~sv~~f~~~a~ 89 (133)
T Consensus 2 ~~~I~LiG~mGsGKstiGk~LA~~L~~~fiD~D~~Ie~-------------------~~g~sI~eif~~~Ge~~FR~~E~ 62 (172)
T PRK03731 2 TQPLFLVGPRGCGKTTVGMALAQALGYRFVDTDLWLQS-------------------TLQMTVAEIVEREGWAGFRARES 62 (172)
T ss_pred CCCEEEECCCCCCHHHHHHHHHHHHCCCEEECCHHHHH-------------------HHCCCHHHHHHHHCHHHHHHHHH
T ss_conf 99889988999988999999999859997978699998-------------------83989999999839899999999
Q ss_pred HHHHHHHHHHCHHHHHHHCCCEEEEECCCHH
Q ss_conf 9999998410000013325985599889308
Q 537021.9.peg.8 90 KKIAEVQKTVFTYNSRWDRSLFSCINRSTLY 120 (133)
Q Consensus 90 ~~i~~i~~~~~~~~~~~~r~~~piivGGTgl 120 (133)
T Consensus 63 ~~l~~l~-----------~~~~VIstGGG~v 82 (172)
T PRK03731 63 AALEAVT-----------APSTVVATGGGII 82 (172)
T ss_pred HHHHHHC-----------CCCEEEEECCCCC
T ss_conf 9999842-----------7882898078642