HHsearch alignment for GI: peg_887 and conserved domain: PRK03731

>PRK03731 aroL shikimate kinase II; Reviewed.
Probab=96.96  E-value=0.0017  Score=42.28  Aligned_cols=81  Identities=12%  Similarity=0.149  Sum_probs=50.8

Q ss_pred             CCEEEEECCCCCCHHHHHHHHHHHCCCEEEECCHHHHHCCCCCCCCCCCHHHHCCCEEEECCEECCCCCCCHHHHHHHHH
Q ss_conf             84999987987334499999998819879750044211682224234676874234043314451376558999999999
Q 537021.9.peg.8   10 TKAIFISGPTASGKSLCAVNLAHKFNGAIINADSMQVYDTLRILTSRPSDQDMQSIPHYLYGYVPAQKSYSTGKWLRYAI   89 (133)
Q Consensus        10 ~~ii~I~GpTasGKT~lai~LA~~~~~~IIs~DS~QvYk~l~IgTaKps~~e~~~v~H~lid~~~~~e~~sv~~f~~~a~   89 (133)
T Consensus         2 ~~~I~LiG~mGsGKstiGk~LA~~L~~~fiD~D~~Ie~-------------------~~g~sI~eif~~~Ge~~FR~~E~   62 (172)
T PRK03731          2 TQPLFLVGPRGCGKTTVGMALAQALGYRFVDTDLWLQS-------------------TLQMTVAEIVEREGWAGFRARES   62 (172)
T ss_pred             CCCEEEECCCCCCHHHHHHHHHHHHCCCEEECCHHHHH-------------------HHCCCHHHHHHHHCHHHHHHHHH
T ss_conf             99889988999988999999999859997978699998-------------------83989999999839899999999


Q ss_pred             HHHHHHHHHHCHHHHHHHCCCEEEEECCCHH
Q ss_conf             9999998410000013325985599889308
Q 537021.9.peg.8   90 KKIAEVQKTVFTYNSRWDRSLFSCINRSTLY  120 (133)
Q Consensus        90 ~~i~~i~~~~~~~~~~~~r~~~piivGGTgl  120 (133)
T Consensus        63 ~~l~~l~-----------~~~~VIstGGG~v   82 (172)
T PRK03731         63 AALEAVT-----------APSTVVATGGGII   82 (172)
T ss_pred             HHHHHHC-----------CCCEEEEECCCCC
T ss_conf             9999842-----------7882898078642