HHsearch alignment for GI: peg_887 and conserved domain: PRK03992
>PRK03992 proteasome-activating nucleotidase; Provisional.
Probab=95.76 E-value=0.018 Score=36.07 Aligned_cols=42 Identities=26% Similarity=0.462 Sum_probs=36.4
Q ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHCCCEEEECCHHHHHCC
Q ss_conf 898499998798733449999999881987975004421168
Q 537021.9.peg.8 8 THTKAIFISGPTASGKSLCAVNLAHKFNGAIINADSMQVYDT 49 (133)
Q Consensus 8 ~~~~ii~I~GpTasGKT~lai~LA~~~~~~IIs~DS~QvYk~ 49 (133)
T Consensus 164 ~pPkGvLLyGPPGtGKTllAkAvA~e~~~~fi~v~~s~l~sk 205 (390)
T PRK03992 164 EPPKGVLLYGPPGTGKTLLAKAVAHETNATFIRVVGSELVQK 205 (390)
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEHHHHHHC
T ss_conf 999727868989997899999999874888799667997524