HHsearch alignment for GI: peg_887 and conserved domain: PRK04195

>PRK04195 replication factor C large subunit; Provisional.
Probab=97.03  E-value=0.00093  Score=43.87  Aligned_cols=33  Identities=30%  Similarity=0.489  Sum_probs=29.0

Q ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHCCCEEEEC
Q ss_conf             984999987987334499999998819879750
Q 537021.9.peg.8    9 HTKAIFISGPTASGKSLCAVNLAHKFNGAIINA   41 (133)
Q Consensus         9 ~~~ii~I~GpTasGKT~lai~LA~~~~~~IIs~   41 (133)
T Consensus        39 ~~k~lLL~GPpGvGKTT~a~~lAk~~g~~viEl   71 (403)
T PRK04195         39 PKKALLLYGPPGVGKTSLAHALANDYGWEVIEL   71 (403)
T ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEE
T ss_conf             574699889399879999999999849985997