HHsearch alignment for GI: peg_887 and conserved domain: PRK05342
>PRK05342 clpX ATP-dependent protease ATP-binding subunit ClpX; Provisional.
Probab=97.65 E-value=4.8e-05 Score=51.64 Aligned_cols=119 Identities=17% Similarity=0.113 Sum_probs=69.6
Q ss_pred CCEEEEECCCCCCHHHHHHHHHHHCCCEEEECCHHHHHC----CCCCCC-------CCCCHHHHCCCEEEECCEECC---
Q ss_conf 849999879873344999999988198797500442116----822242-------346768742340433144513---
Q 537021.9.peg.8 10 TKAIFISGPTASGKSLCAVNLAHKFNGAIINADSMQVYD----TLRILT-------SRPSDQDMQSIPHYLYGYVPA--- 75 (133)
Q Consensus 10 ~~ii~I~GpTasGKT~lai~LA~~~~~~IIs~DS~QvYk----~l~IgT-------aKps~~e~~~v~H~lid~~~~--- 75 (133)
T Consensus 109 KsNILliGPTG~GKTlla~tLAk~l~vPF~iaDAT~lTEaGYVGeDVE~ii~~Llq~Ad~dve~Ae~GIV~IDEIDKIar 188 (411)
T PRK05342 109 KSNILLIGPTGSGKTLLAQTLARILNVPFAIADATTLTEAGYVGEDVENILLKLLQAADYDVEKAQRGIVYIDEIDKIAR 188 (411)
T ss_pred CCCEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECEECCCCCCCCCHHHHHHHHHHHCCCCHHHHHCCEEEEEEHHHHHH
T ss_conf 45389989999778899999999869998998612001267456079999999999828889988368288850234542
Q ss_pred -CC------CCCHHHHHHHHHHHHHHHHHHHCHHHH---------HHHCCCEEEEECCCHHHHHHHHCC
Q ss_conf -76------558999999999999999841000001---------332598559988930899998418
Q 537021.9.peg.8 76 -QK------SYSTGKWLRYAIKKIAEVQKTVFTYNS---------RWDRSLFSCINRSTLYYARNTYCN 128 (133)
Q Consensus 76 -~e------~~sv~~f~~~a~~~i~~i~~~~~~~~~---------~~~r~~~piivGGTglY~~al~~~ 128 (133)
T Consensus 189 ks~~~s~trDVSgEGVQqaLLkiiEGt~v~vp~~ggrkhp~~~~~~idT~nILFI~gGAF~GL~~II~~ 257 (411)
T PRK05342 189 KSENPSITRDVSGEGVQQALLKILEGTVASVPPQGGRKHPQQEFIQVDTTNILFICGGAFDGLEKIIKQ 257 (411)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHCCCEECCCCCCCCCCCCCCEEEEECCCEEEEECCCCCCHHHHHHH
T ss_conf 478888877765124899999987587141188877778776516761471799911553358999986