HHsearch alignment for GI: peg_887 and conserved domain: PRK06731

>PRK06731 flhF flagellar biosynthesis regulator FlhF; Validated.
Probab=96.94  E-value=0.0012  Score=43.23  Aligned_cols=39  Identities=26%  Similarity=0.451  Sum_probs=31.9

Q ss_pred             ECCCCCEEEEECCCCCCHHHHHHHHHHHC-----CCEEEECCHH
Q ss_conf             05898499998798733449999999881-----9879750044
Q 537021.9.peg.8    6 LSTHTKAIFISGPTASGKSLCAVNLAHKF-----NGAIINADSM   44 (133)
Q Consensus         6 ~~~~~~ii~I~GpTasGKT~lai~LA~~~-----~~~IIs~DS~   44 (133)
T Consensus        71 ~~~~~~vI~lvG~~G~GKTTT~AKLA~~~~~~~~kV~lia~Dty  114 (270)
T PRK06731         71 FEKEVQTIALIGPTGVGKTTTLAKMAWQFHGKKKTVGFITTDHS  114 (270)
T ss_pred             CCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCC
T ss_conf             67998189998889898899999999999867990899983888