HHsearch alignment for GI: peg_887 and conserved domain: PRK06731
>PRK06731 flhF flagellar biosynthesis regulator FlhF; Validated.
Probab=96.94 E-value=0.0012 Score=43.23 Aligned_cols=39 Identities=26% Similarity=0.451 Sum_probs=31.9
Q ss_pred ECCCCCEEEEECCCCCCHHHHHHHHHHHC-----CCEEEECCHH
Q ss_conf 05898499998798733449999999881-----9879750044
Q 537021.9.peg.8 6 LSTHTKAIFISGPTASGKSLCAVNLAHKF-----NGAIINADSM 44 (133)
Q Consensus 6 ~~~~~~ii~I~GpTasGKT~lai~LA~~~-----~~~IIs~DS~ 44 (133)
T Consensus 71 ~~~~~~vI~lvG~~G~GKTTT~AKLA~~~~~~~~kV~lia~Dty 114 (270)
T PRK06731 71 FEKEVQTIALIGPTGVGKTTTLAKMAWQFHGKKKTVGFITTDHS 114 (270)
T ss_pred CCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCC
T ss_conf 67998189998889898899999999999867990899983888