HHsearch alignment for GI: peg_887 and conserved domain: PRK06995
>PRK06995 flhF flagellar biosynthesis regulator FlhF; Validated.
Probab=97.10 E-value=0.00062 Score=44.94 Aligned_cols=38 Identities=26% Similarity=0.454 Sum_probs=30.5
Q ss_pred CCCEEEEECCCCCCHHHHHHHHHHHC-------CCEEEECCHHHH
Q ss_conf 98499998798733449999999881-------987975004421
Q 537021.9.peg.8 9 HTKAIFISGPTASGKSLCAVNLAHKF-------NGAIINADSMQV 46 (133)
Q Consensus 9 ~~~ii~I~GpTasGKT~lai~LA~~~-------~~~IIs~DS~Qv 46 (133)
T Consensus 175 ~ggV~alVGPTGVGKTTTiAKLAAr~~l~~g~~kVaLIT~DTYRI 219 (404)
T PRK06995 175 RGGVFALVGPTGVGKTTTTAKLAARCVMRHGASKVALLTTDSYRI 219 (404)
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCH
T ss_conf 475589866888763758999999999983898379997687547