HHsearch alignment for GI: peg_887 and conserved domain: PRK09183
>PRK09183 transposase/IS protein; Provisional.
Probab=96.59 E-value=0.0018 Score=42.09 Aligned_cols=48 Identities=17% Similarity=0.227 Sum_probs=29.7
Q ss_pred CCCEEEEECCCCCCHHHHHHHHHHH---CCCEEEECCHHHHHCCCCCCCCC
Q ss_conf 9849999879873344999999988---19879750044211682224234
Q 537021.9.peg.8 9 HTKAIFISGPTASGKSLCAVNLAHK---FNGAIINADSMQVYDTLRILTSR 56 (133)
Q Consensus 9 ~~~ii~I~GpTasGKT~lai~LA~~---~~~~IIs~DS~QvYk~l~IgTaK 56 (133)
T Consensus 100 ~~~Nvil~G~~GtGKThLA~Alg~~A~~~G~~v~f~~~~~L~~~L~~a~~~ 150 (258)
T PRK09183 100 RNENIVLLGPSGVGKTHLAIALGYEAVRAGIKVRFTTAADLLLQLSTAQRQ 150 (258)
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHC
T ss_conf 588679989999868999999999999879939997899999999999876