HHsearch alignment for GI: peg_887 and conserved domain: PRK09302

>PRK09302 circadian clock protein KaiC; Reviewed.

Probab=93.51  E-value=0.091  Score=31.84  Aligned_cols=24  Identities=33%  Similarity=0.556  Sum_probs=15.5

Q ss_pred             CCCEEEEECCCCCCHHHHHHHHHH
Q ss_conf             984999987987334499999998
Q 537021.9.peg.8    9 HTKAIFISGPTASGKSLCAVNLAH   32 (133)
Q Consensus         9 ~~~ii~I~GpTasGKT~lai~LA~   32 (133)
T Consensus       265 ~GsstLi~Gp~GtGKTtla~qFl~  288 (501)
T PRK09302        265 RGSIILVSGATGTGKTLLVSKFAE  288 (501)
T ss_pred             CCCEEEEECCCCCCHHHHHHHHHH
T ss_conf             894699988999888999999999