HHsearch alignment for GI: peg_887 and conserved domain: PRK10867

>PRK10867 signal recognition particle protein; Provisional.
Probab=93.72  E-value=0.28  Score=28.87  Aligned_cols=73  Identities=15%  Similarity=0.225  Sum_probs=46.0

Q ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHCC------CEEEECCHHHHHCCCCCCCCCCCHHHHCCCEE--EECCEECCCCC
Q ss_conf             58984999987987334499999998819------87975004421168222423467687423404--33144513765
Q 537021.9.peg.8    7 STHTKAIFISGPTASGKSLCAVNLAHKFN------GAIINADSMQVYDTLRILTSRPSDQDMQSIPH--YLYGYVPAQKS   78 (133)
Q Consensus         7 ~~~~~ii~I~GpTasGKT~lai~LA~~~~------~~IIs~DS~QvYk~l~IgTaKps~~e~~~v~H--~lid~~~~~e~   78 (133)
T Consensus        97 ~~~p~VIm~vGLqGsGKTTT~aKLA~~lk~k~~k~vllvaaD-----------t~RpaA~eQL~~la~~~~v~~~~~~~~  165 (453)
T PRK10867         97 AQPPAVVLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVVSAD-----------VYRPAAIKQLETLAEQVGVDFFPSDVG  165 (453)
T ss_pred             CCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCC-----------CCHHHHHHHHHHHHHHCCCCEECCCCC
T ss_conf             899969999746888518589999999997389837985588-----------770589999999998519804367889


Q ss_pred             CCHHHHHHHHHH
Q ss_conf             589999999999
Q 537021.9.peg.8   79 YSTGKWLRYAIK   90 (133)
Q Consensus        79 ~sv~~f~~~a~~   90 (133)
T Consensus       166 ~dp~~ia~~a~~  177 (453)
T PRK10867        166 QKPVDIVNAALK  177 (453)
T ss_pred             CCHHHHHHHHHH
T ss_conf             988999999999