HHsearch alignment for GI: peg_887 and conserved domain: PRK12726

>PRK12726 flagellar biosynthesis regulator FlhF; Provisional.
Probab=96.43  E-value=0.0045  Score=39.76  Aligned_cols=38  Identities=24%  Similarity=0.420  Sum_probs=30.9

Q ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHC-----CCEEEECCHHH
Q ss_conf             898499998798733449999999881-----98797500442
Q 537021.9.peg.8    8 THTKAIFISGPTASGKSLCAVNLAHKF-----NGAIINADSMQ   45 (133)
Q Consensus         8 ~~~~ii~I~GpTasGKT~lai~LA~~~-----~~~IIs~DS~Q   45 (133)
T Consensus       204 ~~g~VIaLVGvnGvGKTTTiAKLA~~l~~~gkkV~LVAaDTFR  246 (407)
T PRK12726        204 SNHRIISLIGQTGVGKTTTLVKLGWQLLKQNRTVGFITTDTFR  246 (407)
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCC
T ss_conf             3690899989998978999999999999779917999706677