HHsearch alignment for GI: peg_887 and conserved domain: PRK13341

>PRK13341 recombination factor protein RarA/unknown domain fusion protein; Reviewed.

Probab=93.68  E-value=0.088  Score=31.92  Aligned_cols=35  Identities=17%  Similarity=0.279  Sum_probs=27.6

Q ss_pred             ECCCCCEEEEECCCCCCHHHHHHHHHHHCCCEEEE
Q ss_conf             05898499998798733449999999881987975
Q 537021.9.peg.8    6 LSTHTKAIFISGPTASGKSLCAVNLAHKFNGAIIN   40 (133)
Q Consensus         6 ~~~~~~ii~I~GpTasGKT~lai~LA~~~~~~IIs   40 (133)
T Consensus        48 ~~~~~~S~Il~GPPGtGKTTLA~iIA~~t~~~F~~   82 (726)
T PRK13341         48 KADRVGSLILYGPPGVGKTTLARIIANHTRAHFSS   82 (726)
T ss_pred             HCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEE
T ss_conf             76999827888979999999999998874886799