HHsearch alignment for GI: peg_887 and conserved domain: PRK13898
>PRK13898 type IV secretion system ATPase VirB4; Provisional.
Probab=94.89 E-value=0.035 Score=34.32 Aligned_cols=34 Identities=29% Similarity=0.395 Sum_probs=26.8
Q ss_pred EEEEECCCCCCHHHHHHHHH---HHCCCEEEECCHHH
Q ss_conf 99998798733449999999---88198797500442
Q 537021.9.peg.8 12 AIFISGPTASGKSLCAVNLA---HKFNGAIINADSMQ 45 (133)
Q Consensus 12 ii~I~GpTasGKT~lai~LA---~~~~~~IIs~DS~Q 45 (133)
T Consensus 448 HtlI~G~TGsGKTtl~~fL~aq~~ky~~~~f~fDkd~ 484 (800)
T PRK13898 448 HTLIIGPTGAGKTVLMNFLCAQAMKFSPRMFFFDKDR 484 (800)
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHHHCCEEEEEECCC
T ss_conf 5699899999899999999999875488799997999