HHsearch alignment for GI: peg_887 and conserved domain: PRK13948

>PRK13948 shikimate kinase; Provisional.
Probab=97.55  E-value=0.00021  Score=47.74  Aligned_cols=78  Identities=10%  Similarity=0.075  Sum_probs=57.9

Q ss_pred             CCEEEECCCCCEEEEECCCCCCHHHHHHHHHHHCCCEEEECCHHHHHCCCCCCCCCCCHHHHCCCEEEECCEECCCCCCC
Q ss_conf             92110058984999987987334499999998819879750044211682224234676874234043314451376558
Q 537021.9.peg.8    1 MMMMFLSTHTKAIFISGPTASGKSLCAVNLAHKFNGAIINADSMQVYDTLRILTSRPSDQDMQSIPHYLYGYVPAQKSYS   80 (133)
Q Consensus         1 ~~~~~~~~~~~ii~I~GpTasGKT~lai~LA~~~~~~IIs~DS~QvYk~l~IgTaKps~~e~~~v~H~lid~~~~~e~~s   80 (133)
T Consensus         1 ~~~~~~p~~~~~IvLIG~mGsGKStiGk~LA~~l~~~fiD~D~~I--------------e~-----~~g~sI~eIF~~~G   61 (182)
T PRK13948          1 MARLEVPRPATFVALAGFMGTGKSRIGWELSRALALHFVDTDKLI--------------TR-----VVGKSIPEVFAQEG   61 (182)
T ss_pred             CCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCEEECHHHH--------------HH-----HHCCCHHHHHHHHC
T ss_conf             986657999981898899999889999999999695988884999--------------99-----88939999999848


Q ss_pred             HHHHHHHHHHHHHHHHH
Q ss_conf             99999999999999984
Q 537021.9.peg.8   81 TGKWLRYAIKKIAEVQK   97 (133)
Q Consensus        81 v~~f~~~a~~~i~~i~~   97 (133)
T Consensus        62 E~~FR~~E~~~l~~l~~   78 (182)
T PRK13948         62 EEYFRACEKEVVRRVTR   78 (182)
T ss_pred             HHHHHHHHHHHHHHHHC
T ss_conf             99999999999999974