HHsearch alignment for GI: peg_887 and conserved domain: PRK13949

Probab=96.63  E-value=0.0042  Score=39.92  Aligned_cols=67  Identities=16%  Similarity=0.166  Sum_probs=46.6

Q ss_pred             CEEEEECCCCCCHHHHHHHHHHHCCCEEEECCHHHHHCCCCCCCCCCCHHHHCCCEEEECCEECCCCCCCHHHHHHHHHH
Q ss_conf             49999879873344999999988198797500442116822242346768742340433144513765589999999999
Q 537021.9.peg.8   11 KAIFISGPTASGKSLCAVNLAHKFNGAIINADSMQVYDTLRILTSRPSDQDMQSIPHYLYGYVPAQKSYSTGKWLRYAIK   90 (133)
Q Consensus        11 ~ii~I~GpTasGKT~lai~LA~~~~~~IIs~DS~QvYk~l~IgTaKps~~e~~~v~H~lid~~~~~e~~sv~~f~~~a~~   90 (133)
T Consensus         2 k~I~LiG~mGsGKstiGk~La~~l~~~fiD~D~~Ie--------------~~-----~g~sI~eif~~~Ge~~FR~~E~~   62 (169)
T PRK13949          2 ARIFLVGYMGAGKTTLGKALARELGLSFIDLDFFIE--------------NR-----FHKTVGDIFAERGEAVFRELERN   62 (169)
T ss_pred             CCEEEECCCCCCHHHHHHHHHHHHCCCEEECCHHHH--------------HH-----HCCCHHHHHHHHCHHHHHHHHHH
T ss_conf             838997999998899999999995999797849999--------------98-----59999999998698999999999


Q ss_pred             HHHHHH
Q ss_conf             999998
Q 537021.9.peg.8   91 KIAEVQ   96 (133)
Q Consensus        91 ~i~~i~   96 (133)
T Consensus        63 ~l~~l~   68 (169)
T PRK13949         63 MLHEVA   68 (169)
T ss_pred             HHHHHH
T ss_conf             999984