HHsearch alignment for GI: peg_887 and conserved domain: TIGR00017
>TIGR00017 cmk cytidylate kinase; InterPro: IPR003136 This family consists of cytidylate kinase (2.7.4.14 from EC), which catalyzes the phosphorylation of cytidine 5-monophosphate (dCMP) to cytidine 5 -diphosphate (dCDP) in the presence of ATP or GTP. UMP and dCMP can also act as acceptors .; GO: 0004127 cytidylate kinase activity, 0005524 ATP binding, 0006139 nucleobase nucleoside nucleotide and nucleic acid metabolic process.
Probab=96.41 E-value=0.0034 Score=40.49 Aligned_cols=43 Identities=33% Similarity=0.443 Sum_probs=35.1
Q ss_pred CCCEEEEECCCCCCHHHHHHHHHHHCCCEEEECCHHHHHCCCCCC
Q ss_conf 984999987987334499999998819879750044211682224
Q 537021.9.peg.8 9 HTKAIFISGPTASGKSLCAVNLAHKFNGAIINADSMQVYDTLRIL 53 (133)
Q Consensus 9 ~~~ii~I~GpTasGKT~lai~LA~~~~~~IIs~DS~QvYk~l~Ig 53 (133)
T Consensus 1 ~~~~IAIDGPs~aGKStvak~~A~~L~y~yl--dsG~mYR~~a~~ 43 (223)
T TIGR00017 1 MKMIIAIDGPSGAGKSTVAKAVAEKLGYKYL--DSGAMYRALALA 43 (223)
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHCCCEEE--CCCHHHHHHHHH
T ss_conf 9863762377646557899999986295021--443289999999