HHsearch alignment for GI: peg_887 and conserved domain: TIGR02928
>TIGR02928 TIGR02928 orc1/cdc6 family replication initiation protein; InterPro: IPR014277 This set of DNA binding proteins shows homology to the origin recognition complex subunit 1/cell division control protein 6 family in eukaryotes. The proteins in this entry are found exclusively in the archaea. Several members may be found in a genome and interact with each other..
Probab=96.60 E-value=0.0032 Score=40.63 Aligned_cols=83 Identities=22% Similarity=0.231 Sum_probs=52.2
Q ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHCCCEEEECCHHHHHCCCCCCCCCCCHHHH-------CCCEEEE----CCEECC
Q ss_conf 58984999987987334499999998819879750044211682224234676874-------2340433----144513
Q 537021.9.peg.8 7 STHTKAIFISGPTASGKSLCAVNLAHKFNGAIINADSMQVYDTLRILTSRPSDQDM-------QSIPHYL----YGYVPA 75 (133)
Q Consensus 7 ~~~~~ii~I~GpTasGKT~lai~LA~~~~~~IIs~DS~QvYk~l~IgTaKps~~e~-------~~v~H~l----id~~~~ 75 (133)
T Consensus 40 G~~P~Ni~iYGkTGtGKT~vt~~v~~~l~~~~~~~d~~------D~~~~~~NC~~~~T~y~~~~~L~~~ln~~~~~~~vP 113 (383)
T TIGR02928 40 GSRPSNIFIYGKTGTGKTAVTKYVMKELEEAAEDRDVR------DVSTVYINCQILDTSYQVLVELANQLNRRGSGEEVP 113 (383)
T ss_pred CCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCC------CEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 48987258878889878899999999999986226997------158999778546846999999999851577888898
Q ss_pred CCCCCHHHHHHHHHHHHH-HH
Q ss_conf 765589999999999999-99
Q 537021.9.peg.8 76 QKSYSTGKWLRYAIKKIA-EV 95 (133)
Q Consensus 76 ~e~~sv~~f~~~a~~~i~-~i 95 (133)
T Consensus 114 ~tG~s~~~~~~~l~~~l~~~~ 134 (383)
T TIGR02928 114 TTGLSTSEVFRELYKELNRER 134 (383)
T ss_pred CCCCCHHHHHHHHHHHHHHHC
T ss_conf 877878999999999983201