HHsearch alignment for GI: peg_887 and conserved domain: TIGR03015
>TIGR03015 pepcterm_ATPase putative secretion ATPase, PEP-CTERM locus subfamily. Members of this protein are marked as probable ATPases by the nucleotide binding P-loop motif GXXGXGKTT, a motif DEAQ similar to the DEAD/H box of helicases, and extensive homology to ATPases of MSHA-type pilus systems and to GspA proteins associated with type II protein secretion systems.
Probab=94.07 E-value=0.26 Score=29.05 Aligned_cols=31 Identities=29% Similarity=0.445 Sum_probs=26.4
Q ss_pred ECCCCCEEEEECCCCCCHHHHHHHHHHHCCC
Q ss_conf 0589849999879873344999999988198
Q 537021.9.peg.8 6 LSTHTKAIFISGPTASGKSLCAVNLAHKFNG 36 (133)
Q Consensus 6 ~~~~~~ii~I~GpTasGKT~lai~LA~~~~~ 36 (133)
T Consensus 39 l~~~~g~~lltGe~GtGKTtllr~l~~~l~~ 69 (269)
T TIGR03015 39 LSQREGFILITGEVGAGKTTLIRNLLKRLDQ 69 (269)
T ss_pred HHCCCCEEEEECCCCCCHHHHHHHHHHHCCC
T ss_conf 9648965999729989889999999984593