HHsearch alignment for GI: peg_887 and conserved domain: TIGR03345
>TIGR03345 VI_ClpV1 type VI secretion ATPase, ClpV1 family. Members of this protein family are homologs of ClpB, an ATPase associated with chaperone-related functions. These ClpB homologs, designated ClpV1, are a key component of the bacterial pathogenicity-associated type VI secretion system.
Probab=96.88 E-value=0.0014 Score=42.79 Aligned_cols=61 Identities=21% Similarity=0.402 Sum_probs=40.7
Q ss_pred CCCCCE--EEEECCCCCCHHHHHHHHHHHC-CCE--EEECCHHHHHCCCCCCCCCCCHHHHCCCEEEECCEEC
Q ss_conf 589849--9998798733449999999881-987--9750044211682224234676874234043314451
Q 537021.9.peg.8 7 STHTKA--IFISGPTASGKSLCAVNLAHKF-NGA--IINADSMQVYDTLRILTSRPSDQDMQSIPHYLYGYVP 74 (133)
Q Consensus 7 ~~~~~i--i~I~GpTasGKT~lai~LA~~~-~~~--IIs~DS~QvYk~l~IgTaKps~~e~~~v~H~lid~~~ 74 (133)
T Consensus 591 d~~rPigsFLFlGPTGVGKTElAK~LA~~LFg~e~~liR~D-MSEy------~E~hsvsrLiGaPPGYVGy~e 656 (852)
T TIGR03345 591 DPRKPLGVFLLVGPSGVGKTETALALAELLYGGEQNLITIN-MSEF------QEAHTVSRLKGSPPGYVGYGE 656 (852)
T ss_pred CCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEC-CHHH------CCHHHHHHHCCCCCCCCCCCC
T ss_conf 99998568998789987789999999999719861147842-2432------104368786389997667487