HHsearch alignment for GI: peg_887 and conserved domain: TIGR03375
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=90.50 E-value=0.24 Score=29.28 Aligned_cols=26 Identities=27% Similarity=0.221 Sum_probs=22.5
Q ss_pred CCCEEEEECCCCCCHHHHHHHHHHHC
Q ss_conf 98499998798733449999999881
Q 537021.9.peg.8 9 HTKAIFISGPTASGKSLCAVNLAHKF 34 (133)
Q Consensus 9 ~~~ii~I~GpTasGKT~lai~LA~~~ 34 (133)
T Consensus 490 ~Ge~vaIvG~sGsGKSTL~kll~Gl~ 515 (694)
T TIGR03375 490 PGEKVAIIGRIGSGKSTLLKLLLGLY 515 (694)
T ss_pred CCCEEEEEECCCCCHHHHHHHHCCCC
T ss_conf 99789998058987889999855675