HHsearch alignment for GI: peg_887 and conserved domain: TIGR03420

>TIGR03420 DnaA_homol_Hda DnaA regulatory inactivator Hda. Members of this protein family are Hda (Homologous to DnaA). These proteins are about half the length of DnaA and homologous over length of Hda. In the model species Escherichia coli, the initiation of DNA replication requires DnaA bound to ATP rather than ADP; Hda helps facilitate the conversion of DnaA-ATP to DnaA-ADP.

Probab=95.95  E-value=0.029  Score=34.86  Aligned_cols=28  Identities=18%  Similarity=0.218  Sum_probs=23.3

Q ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHCCC
Q ss_conf             9849999879873344999999988198
Q 537021.9.peg.8    9 HTKAIFISGPTASGKSLCAVNLAHKFNG   36 (133)
Q Consensus         9 ~~~ii~I~GpTasGKT~lai~LA~~~~~   36 (133)
T Consensus        37 ~~~~l~i~G~~GsGKTHLl~a~~~~~~~   64 (226)
T TIGR03420        37 GDRFLYLWGESGSGKSHLLQAACAAAEE   64 (226)
T ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHHC
T ss_conf             8886999899999889999999999862