HHsearch alignment for GI: peg_887 and conserved domain: cd01131

>cd01131 PilT Pilus retraction ATPase PilT. PilT is a nucleotide binding protein responsible for the retraction of type IV pili, likely by pili disassembly. This retraction provides the force required for travel of bacteria in low water environments by a mechanism known as twitching motility.

Probab=96.55  E-value=0.0071  Score=38.53  Aligned_cols=31  Identities=29%  Similarity=0.488  Sum_probs=24.6

Q ss_pred             CEEEEECCCCCCHHHHHHHHHHHCCC----EEEEC
Q ss_conf             49999879873344999999988198----79750
Q 537021.9.peg.8   11 KAIFISGPTASGKSLCAVNLAHKFNG----AIINA   41 (133)
Q Consensus        11 ~ii~I~GpTasGKT~lai~LA~~~~~----~IIs~   41 (133)
T Consensus         2 GliLitG~TGSGKTTtl~all~~i~~~~~~~IiTi   36 (198)
T cd01131           2 GLVLVTGPTGSGKSTTLAAMIDYINKNKTHHILTI   36 (198)
T ss_pred             CEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEE
T ss_conf             38999899999799999999985363788369996