HHsearch alignment for GI: peg_887 and conserved domain: cd03218
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=91.43 E-value=0.58 Score=26.99 Aligned_cols=72 Identities=14% Similarity=0.114 Sum_probs=38.4
Q ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHCCCEEEECCHHHH-HCCCCCCCCCCCHHHHCCCEEEECCEECCCCCCCHHHHH
Q ss_conf 898499998798733449999999881987975004421-168222423467687423404331445137655899999
Q 537021.9.peg.8 8 THTKAIFISGPTASGKSLCAVNLAHKFNGAIINADSMQV-YDTLRILTSRPSDQDMQSIPHYLYGYVPAQKSYSTGKWL 85 (133)
Q Consensus 8 ~~~~ii~I~GpTasGKT~lai~LA~~~~~~IIs~DS~Qv-Yk~l~IgTaKps~~e~~~v~H~lid~~~~~e~~sv~~f~ 85 (133)
T Consensus 24 ~~Gei~~llGpNGAGKSTll~~i~Gl~~-----p~~G~I~~~g~di~~~~~~~r~r~gig~-~pQ~~~l~~~ltV~enl 96 (232)
T cd03218 24 KQGEIVGLLGPNGAGKTTTFYMIVGLVK-----PDSGKILLDGQDITKLPMHKRARLGIGY-LPQEASIFRKLTVEENI 96 (232)
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHCCCC-----CCCEEEEECCEECCCCCHHHHHHCCEEE-CCCCCCCCCCCCHHHHH
T ss_conf 9995999999999619999999977999-----9862999999999999999999719798-77777678888899999