>cd03237 ABC_RNaseL_inhibitor_domain2 The ATPase domain 2 of RNase L inhibitor. The ABC ATPase, RNase L inhibitor (RLI), is a key enzyme in ribosomal biogenesis, formation of translation preinitiation complexes, and assembly of HIV capsids. RLI's are not transport proteins and thus cluster with a group of soluble proteins that lack the transmembrane components commonly found in other members of the family. Structurally, RLI's have an N-terminal Fe-S domain and two nucleotide-binding domains which are arranged to form two composite active sites in their interface cleft. RLI is one of the most conserved enzymes between archaea and eukaryotes with a sequence identity of more than 48%. The high degree of evolutionary conservation suggests that RLI performs a central role in archaeal and eukaryotic physiology.

Probab=91.71  E-value=0.19  Score=29.92  Aligned_cols=30  Identities=33%  Similarity=0.427  Sum_probs=24.8

Q ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHC---CCEE
Q ss_conf             98499998798733449999999881---9879
Q 537021.9.peg.8    9 HTKAIFISGPTASGKSLCAVNLAHKF---NGAI   38 (133)
Q Consensus         9 ~~~ii~I~GpTasGKT~lai~LA~~~---~~~I   38 (133)
T Consensus        24 ~GEiv~liGpNGaGKSTLlk~l~Gll~p~~G~I   56 (246)
T cd03237          24 ESEVIGILGPNGIGKTTFIKMLAGVLKPDEGDI   56 (246)
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEE
T ss_conf             798999997999769999999977878886079