HHsearch alignment for GI: peg_887 and conserved domain: cd03279
>cd03279 ABC_sbcCD SbcCD and other Mre11/Rad50 (MR) complexes are implicated in the metabolism of DNA ends. They cleave ends sealed by hairpin structures and are thought to play a role in removing protein bound to DNA termini.
Probab=92.94 E-value=0.13 Score=30.88 Aligned_cols=29 Identities=28% Similarity=0.433 Sum_probs=22.4
Q ss_pred CCCEEEEECCCCCCHHHHHHHHHHHCCCE
Q ss_conf 98499998798733449999999881987
Q 537021.9.peg.8 9 HTKAIFISGPTASGKSLCAVNLAHKFNGA 37 (133)
Q Consensus 9 ~~~ii~I~GpTasGKT~lai~LA~~~~~~ 37 (133)
T Consensus 27 ~~~lflI~G~nGsGKSTIlDAI~~aLYGk 55 (213)
T cd03279 27 NNGLFLICGPTGAGKSTILDAITYALYGK 55 (213)
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHCCC
T ss_conf 78889998899997889999999998388