HHsearch alignment for GI: peg_887 and conserved domain: cd03293

>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=91.61  E-value=0.2  Score=29.78  Aligned_cols=27  Identities=22%  Similarity=0.224  Sum_probs=23.1

Q ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHC
Q ss_conf             898499998798733449999999881
Q 537021.9.peg.8    8 THTKAIFISGPTASGKSLCAVNLAHKF   34 (133)
Q Consensus         8 ~~~~ii~I~GpTasGKT~lai~LA~~~   34 (133)
T Consensus        28 ~~Ge~~~iiGpsGsGKSTLl~~i~Gl~   54 (220)
T cd03293          28 EEGEFVALVGPSGCGKSTLLRIIAGLE   54 (220)
T ss_pred             CCCCEEEEECCCCCHHHHHHHHHHCCC
T ss_conf             799899999999957999999997599