>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.

Probab=92.77  E-value=0.12  Score=31.16  Aligned_cols=27  Identities=22%  Similarity=0.223  Sum_probs=22.9

Q ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHC
Q ss_conf             898499998798733449999999881
Q 537021.9.peg.8    8 THTKAIFISGPTASGKSLCAVNLAHKF   34 (133)
Q Consensus         8 ~~~~ii~I~GpTasGKT~lai~LA~~~   34 (133)
T Consensus        48 ~~GE~~~ivG~SGsGKSTLLr~i~GL~   74 (269)
T cd03294          48 REGEIFVIMGLSGSGKSTLLRCINRLI   74 (269)
T ss_pred             CCCCEEEEECCCCCHHHHHHHHHHCCC
T ss_conf             899999999899848999999997599