>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.

Probab=92.13  E-value=0.16  Score=30.33  Aligned_cols=32  Identities=22%  Similarity=0.425  Sum_probs=25.4

Q ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHC---CCEEE
Q ss_conf             898499998798733449999999881---98797
Q 537021.9.peg.8    8 THTKAIFISGPTASGKSLCAVNLAHKF---NGAII   39 (133)
Q Consensus         8 ~~~~ii~I~GpTasGKT~lai~LA~~~---~~~II   39 (133)
T Consensus        25 ~~Ge~~~ilGpSG~GKSTllr~i~gl~~p~~G~I~   59 (242)
T cd03295          25 AKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIF   59 (242)
T ss_pred             CCCCEEEEECCCCCHHHHHHHHHHCCCCCCCEEEE
T ss_conf             69989999999995699999999759999815999