HHsearch alignment for GI: peg_887 and conserved domain: pfam00004

>pfam00004 AAA ATPase family associated with various cellular activities (AAA). AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes.
Probab=96.08  E-value=0.0047  Score=39.61  Aligned_cols=35  Identities=20%  Similarity=0.450  Sum_probs=31.6

Q ss_pred             EEEECCCCCCHHHHHHHHHHHCCCEEEECCHHHHH
Q ss_conf             99987987334499999998819879750044211
Q 537021.9.peg.8   13 IFISGPTASGKSLCAVNLAHKFNGAIINADSMQVY   47 (133)
Q Consensus        13 i~I~GpTasGKT~lai~LA~~~~~~IIs~DS~QvY   47 (133)
T Consensus         1 iLl~GppGtGKT~~a~~la~~~~~~~~~v~~~~~~   35 (131)
T pfam00004         1 LLLYGPPGTGKTTLAKAVAKELGAPFIEISGSELV   35 (131)
T ss_pred             CEEECCCCCCHHHHHHHHHHHHCCCCEECCCCCCC
T ss_conf             98789999999999999999978985332420122