HHsearch alignment for GI: peg_887 and conserved domain: pfam04851
>pfam04851 ResIII Type III restriction enzyme, res subunit.
Probab=91.98 E-value=0.14 Score=30.75 Aligned_cols=36 Identities=22% Similarity=0.228 Sum_probs=24.5
Q ss_pred EEEEECCCCCCHHHHHHHHHHHCC----CEEEECCHHHHH
Q ss_conf 999987987334499999998819----879750044211
Q 537021.9.peg.8 12 AIFISGPTASGKSLCAVNLAHKFN----GAIINADSMQVY 47 (133)
Q Consensus 12 ii~I~GpTasGKT~lai~LA~~~~----~~IIs~DS~QvY 47 (133)
T Consensus 20 ~~~i~~pTGsGKT~~~~~~i~~~~~~~~~~lvlvp~~~L~ 59 (103)
T pfam04851 20 RGLIVMATGSGKTLTAAKLIARLLKGKKKVLFLVPRKDLL 59 (103)
T ss_pred CEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCHHHH
T ss_conf 8699958999879999999999984699299990829999