HHsearch alignment for GI: peg_887 and conserved domain: smart00382

>smart00382 AAA ATPases associated with a variety of cellular activities. AAA - ATPases associated with a variety of cellular activities. This profile/alignment only detects a fraction of this vast family. The poorly conserved N-terminal helix is missing from the alignment.

Probab=96.62  E-value=0.0029  Score=40.90  Aligned_cols=38  Identities=32%  Similarity=0.483  Sum_probs=29.8

Q ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHCCCE---EEECCHHHH
Q ss_conf             98499998798733449999999881987---975004421
Q 537021.9.peg.8    9 HTKAIFISGPTASGKSLCAVNLAHKFNGA---IINADSMQV   46 (133)
Q Consensus         9 ~~~ii~I~GpTasGKT~lai~LA~~~~~~---IIs~DS~Qv   46 (133)
T Consensus         1 ~~~~ill~G~~GsGKTtl~~~la~~~~~~~~~v~~~~~~~~   41 (148)
T smart00382        1 PGEVILIVGPPGSGKTTLARALARELGPPGGGVIYIDGEDI   41 (148)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEEHHHH
T ss_conf             99789999999702999999999872668996899875998