HHsearch alignment for GI: peg_887 and conserved domain: smart00487
>smart00487 DEXDc DEAD-like helicases superfamily.
Probab=92.84 E-value=0.12 Score=31.08 Aligned_cols=41 Identities=24% Similarity=0.378 Sum_probs=26.8
Q ss_pred CEEEEECCCCCCHHHHHHHHHHHC-C-----CEEEECC----HHHHHCCCC
Q ss_conf 499998798733449999999881-9-----8797500----442116822
Q 537021.9.peg.8 11 KAIFISGPTASGKSLCAVNLAHKF-N-----GAIINAD----SMQVYDTLR 51 (133)
Q Consensus 11 ~ii~I~GpTasGKT~lai~LA~~~-~-----~~IIs~D----S~QvYk~l~ 51 (133)
T Consensus 25 ~~~~i~~~tGsGKT~~~~~~~~~~~~~~~~~~~li~~P~~~l~~q~~~~~~ 75 (201)
T smart00487 25 RDVILAAPTGSGKTLAALLPALEALKRGKGKRVLVLVPTRELAEQWAEELK 75 (201)
T ss_pred CCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHH
T ss_conf 988998999960999999999998633899759999085999999998860