HHsearch alignment of GI: peg_888 and MMDB domain: 3eph_A_1-111_185-343
>3eph_A (A:1-111,A:185-343) TRNA isopentenyltransferase; transferase, alternative initiation, ATP-binding, cytoplasm, mitochondrion, nucleotide-binding, nucleus; 2.95A {Saccharomyces cerevisiae} PDB: 3epj_A 3epk_A* 3epl_A*
Probab=100.00 E-value=2.9e-34 Score=245.02 Aligned_cols=142 Identities=20% Similarity=0.281 Sum_probs=110.7
Q ss_pred CCHHHHHH-HHHHHHHHHCCCCHH-----HHHHHCCCCCCCCHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 70156999-999999853488746-----775415456777001000010786789999999777654211345677775
Q 537021.9.peg.8 74 HPSDGQRI-ARALEIKLVSGQSII-----EFWKQAPNPFIPLESAHKIIILPERSALKERIRRRFTQMLESGAIDEIRSL 147 (217)
Q Consensus 74 ~~nd~~Ri-~RaLEi~~~tGk~~s-----~~~~~~~~~~~~~~~~~~i~l~~~r~~L~~rI~~R~~~Ml~~GlieEv~~L 147 (217)
..++.... .++++-...+|+.+. -+..+.-....+.+++++|||++||+.|++||+.||+.|+++||++||+.|
T Consensus 72 ~~~~f~~~a~~~~~~i~~~~~~~IivgGt~~yl~~~~~~l~~~~~l~~~l~~~r~~L~~ri~~Rvd~M~~~Gl~~Ev~~l 151 (270)
T 3eph_A 72 YSHRFETECMNAIEDIHRRGKIPIVVGGTHYYLQTLFNKRLKFDTLFLWLYSKPEPLFQRLDDRVDDMLERGALQEIKQL 151 (270)
T ss_dssp CHHHHHHHHHHHHHHHHTTTCEEEEECSCGGGGGGGGTCSCSSEEEEEEEECCHHHHHHHHHHHHHHHHHTTHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_conf 89999999998654554045732896798615998863022212222245788788999999999999977769999999
Q ss_pred HHCC-------CCCHHHHHHCCCHHHHHHHHCCC-----CCHHHHHHHHHHHHHHHHHHHHHHHCCC------CCCCCCC
Q ss_conf 1138-------63101344206856778986789-----9989999999999998888876886288------8753116
Q 537021.9.peg.8 148 MKMN-------LSLDLPIMKAIGVRDIIALLKGE-----INYDETLQRGIIATNKYAKRQKTWLCHQ------FQADWIR 209 (217)
Q Consensus 148 ~~~~-------~~~~~~~~~~IGYke~~~yL~g~-----~~~~e~~e~~~~~Tr~yAKRQ~TWfr~~------~~~~w~~ 209 (217)
++.+ .+.+.++++||||||+.+||+|+ .++++|++.++++||||||||+|||||+ .+++|+|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~qaIGykE~~~yl~~~~~~~~~~~~e~~~~~~~~Tr~yAKrQ~tWfr~~~~~~~~~~i~~ld 231 (270)
T 3eph_A 152 YEYYSQNKFTPEQCENGVWQVIGFKEFLPWLTGKTDDNTVKLEDCIERMKTRTRQYAKRQVKWIKKMLIPDIKGDIYLLD 231 (270)
T ss_dssp HHHHTTTTCCGGGTTSGGGGSTTTGGGGGGGC-------CCHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHTTTCEEEEE
T ss_pred HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 97336565673210126887734999999973877656358999999999999999999999986434311489743047
Q ss_pred CCCHHC
Q ss_conf 983010
Q 537021.9.peg.8 210 ISSIDD 215 (217)
Q Consensus 210 ~~~~d~ 215 (217)
.++.++
T Consensus 232 ~~~~~~ 237 (270)
T 3eph_A 232 ATDLSQ 237 (270)
T ss_dssp CSCTTT
T ss_pred CHHHHH
T ss_conf 416778