HHsearch alignment of GI: peg_888 and MMDB domain: 3exa_A_201-282

>3exa_A (A:201-282) TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacillus halodurans} PDB: 2qgn_A
Probab=99.93  E-value=7.6e-26  Score=189.90  Aligned_cols=82  Identities=33%  Similarity=0.521  Sum_probs=79.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             78999999977765421134567777511386310134420685677898678999899999999999988888768862
Q 537021.9.peg.8  121 RSALKERIRRRFTQMLESGAIDEIRSLMKMNLSLDLPIMKAIGVRDIIALLKGEINYDETLQRGIIATNKYAKRQKTWLC  200 (217)
Q Consensus       121 r~~L~~rI~~R~~~Ml~~GlieEv~~L~~~~~~~~~~~~~~IGYke~~~yL~g~~~~~e~~e~~~~~Tr~yAKRQ~TWfr  200 (217)
                      |+.|++||+.||+.|+++||++||+.|++. ++.+.++++||||+|+.+||+|++++++|++.++++||||||||+||||
T Consensus         1 R~~L~~rI~~Rv~~M~~~GlieEv~~l~~~-~~~~~~~~~aIGy~E~~~~l~g~~~~~ea~e~i~~~Tr~yAKRQ~tWfr   79 (82)
T 3exa_A            1 RDVLYDRINRRVDQXVEEGLIDEAKKLYDR-GIRDCQSVQAIGYKEXYDYLDGNVTLEEAIDTLKRNSRRYAKRQLTWFR   79 (82)
T ss_dssp             HHHHHHHHHHHHHHHHHHTHHHHHHHHHHT-TCCSSTGGGSTTTHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHCCCCHHHHHHHHH-CCCCCCHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             577999999999999974886056778750-7753305430009999999859999999999999999999999999818


Q ss_pred             CCC
Q ss_conf             888
Q 537021.9.peg.8  201 HQF  203 (217)
Q Consensus       201 ~~~  203 (217)
                      +++
T Consensus        80 ~~~   82 (82)
T 3exa_A           80 NKA   82 (82)
T ss_dssp             TST
T ss_pred             CCC
T ss_conf             999