Query 537021.9.peg.888_1
Match_columns 217
No_of_seqs 126 out of 2919
Neff 6.8
Searched_HMMs 33803
Date Wed May 25 04:40:35 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i peg_888.hhm -d /home/congqian_1/database/mmdb/mmdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 >3eph_A TRNA isopentenyltransf 100.0 2.9E-34 8.5E-39 245.0 9.8 142 74-215 72-237 (270)
2 >3crm_A TRNA delta(2)-isopente 99.9 3.9E-26 1.2E-30 191.8 10.1 83 121-203 1-84 (84)
3 >3exa_A TRNA delta(2)-isopente 99.9 7.6E-26 2.3E-30 189.9 9.4 82 121-203 1-82 (82)
4 >3a8t_A Adenylate isopentenylt 99.9 6.6E-26 2E-30 190.3 8.0 86 122-207 2-111 (111)
5 >3foz_A TRNA delta(2)-isopente 99.9 1.4E-25 4.1E-30 188.2 9.2 83 120-202 1-84 (84)
6 >3d3q_A TRNA delta(2)-isopente 99.9 1.4E-25 4.2E-30 188.1 8.4 82 121-203 1-82 (82)
7 >3crm_A TRNA delta(2)-isopente 99.7 5.3E-20 1.6E-24 151.7 -3.9 128 7-136 89-216 (239)
8 >3eph_A TRNA isopentenyltransf 99.6 2.4E-16 7.1E-21 127.7 3.2 71 34-104 2-72 (73)
9 >3exa_A TRNA delta(2)-isopente 99.4 1.8E-12 5.5E-17 102.3 10.4 142 4-148 83-234 (240)
10 >3d3q_A TRNA delta(2)-isopente 99.2 9.9E-13 2.9E-17 104.1 0.8 58 35-93 5-62 (62)
11 >3foz_A TRNA delta(2)-isopente 99.1 1.7E-09 5.1E-14 82.8 11.0 112 7-120 94-205 (232)
12 >2ze6_A Isopentenyl transferas 96.6 0.00088 2.6E-08 45.5 1.7 35 7-41 85-119 (125)
13 >3d3q_A TRNA delta(2)-isopente 96.5 0.0032 9.4E-08 41.8 4.3 29 7-35 91-119 (182)
14 >3a8t_A Adenylate isopentenylt 96.5 0.0011 3.3E-08 44.8 2.0 74 5-90 123-196 (228)
15 >2ze6_A Isopentenyl transferas 93.8 0.52 1.5E-05 27.4 8.2 79 120-200 2-98 (128)
16 >3fhg_A Mjogg, N-glycosylase/D 69.4 6.4 0.00019 20.2 3.9 52 122-173 9-63 (69)
17 >1xfk_A Formimidoylglutamase; 47.1 14 0.00042 18.0 2.5 30 3-32 108-137 (336)
18 >1hsk_A UDP-N-acetylenolpyruvo 44.6 11 0.00032 18.7 1.6 28 69-96 49-76 (121)
19 >1gq6_A Proclavaminate amidino 43.7 14 0.00042 17.9 2.1 27 5-31 104-130 (313)
20 >2yvu_A Probable adenylyl-sulf 42.3 25 0.00074 16.3 3.1 71 111-190 113-183 (186)
21 >2a0m_A Arginase superfamily p 38.3 23 0.00069 16.5 2.5 29 4-32 103-132 (316)
22 >2aeb_A Arginase 1; hydrolase, 37.2 19 0.00057 17.1 1.9 28 5-32 84-111 (322)
23 >1woh_A Agmatinase; alpha/beta 36.8 23 0.00067 16.6 2.2 29 7-35 106-134 (305)
24 >1pq3_A Arginase II, mitochond 35.4 21 0.00064 16.8 1.9 29 5-33 80-108 (306)
25 >3lhl_A Putative agmatinase; p 35.3 27 0.0008 16.1 2.4 26 7-32 83-108 (287)
26 >3ezx_A MMCP 1, monomethylamin 34.8 8.3 0.00025 19.5 -0.3 12 58-69 50-61 (130)
27 >2exr_A Cytokinin dehydrogenas 32.1 25 0.00073 16.4 1.8 31 66-96 59-90 (115)
28 >3h0k_A UPF0200 protein SSO104 31.8 21 0.00063 16.8 1.4 74 111-192 101-177 (178)
29 >1qf9_A UMP/CMP kinase, protei 31.6 27 0.0008 16.1 1.9 78 111-190 111-191 (194)
30 >2cev_A Protein (arginase); en 30.5 36 0.0011 15.3 2.4 27 6-32 83-109 (299)
31 >1t6c_A Exopolyphosphatase; al 28.8 41 0.0012 14.9 2.8 21 14-34 72-92 (162)
32 >1p9l_A Dihydrodipicolinate re 28.1 42 0.0013 14.8 2.6 14 10-23 66-79 (134)
33 >1zr6_A Glucooligosaccharide o 27.7 29 0.00086 15.9 1.5 31 66-96 40-70 (95)
34 >2uuu_A Alkyldihydroxyacetonep 27.5 26 0.00078 16.2 1.3 32 65-96 58-89 (117)
35 >1tev_A UMP-CMP kinase; ploop, 26.9 31 0.00091 15.7 1.5 77 110-188 113-192 (196)
36 >2waq_Q DNA-directed RNA polym 26.6 24 0.00072 16.4 1.0 26 170-195 54-79 (104)
37 >1wvf_A 4-cresol dehydrogenase 26.1 38 0.0011 15.2 1.9 29 68-96 56-84 (112)
38 >1rm6_B 4-hydroxybenzoyl-COA r 26.1 46 0.0014 14.6 2.3 28 2-29 15-42 (216)
39 >2q2e_A Type II DNA topoisomer 25.6 36 0.0011 15.3 1.7 80 76-174 24-110 (117)
40 >1xrs_B D-lysine 5,6-aminomuta 25.4 37 0.0011 15.2 1.7 13 117-129 71-83 (168)
41 >3dyt_A Sorting nexin-9; 3-hel 25.2 26 0.00076 16.3 0.8 11 12-22 1-11 (124)
42 >1db3_A GDP-mannose 4,6-dehydr 25.1 35 0.001 15.4 1.6 19 12-30 1-19 (190)
43 >2nzw_A Alpha1,3-fucosyltransf 24.9 49 0.0014 14.5 2.6 20 3-22 72-91 (134)
44 >1rkx_A CDP-glucose-4,6-dehydr 24.8 37 0.0011 15.3 1.6 21 9-29 6-26 (357)
45 >1ffv_C CUTM, flavoprotein of 24.8 47 0.0014 14.5 2.2 28 3-30 15-44 (176)
46 >1kht_A Adenylate kinase; phos 24.5 16 0.00049 17.5 -0.2 75 111-188 115-191 (192)
47 >1f0x_A DLDH, D-lactate dehydr 24.2 50 0.0015 14.4 2.5 32 65-96 42-73 (103)
48 >2ef5_A Arginase; TTHA1496, st 24.1 22 0.00066 16.7 0.4 22 8-29 82-103 (290)
49 >2ond_A Cleavage stimulation f 24.0 18 0.00053 17.3 -0.1 16 152-167 14-29 (29)
50 >1e8g_A Vanillyl-alcohol oxida 23.9 44 0.0013 14.7 1.9 26 71-96 73-98 (126)
51 >1gy8_A UDP-galactose 4-epimer 23.1 41 0.0012 14.9 1.6 19 12-30 2-20 (397)
52 >1nks_A Adenylate kinase; ther 23.0 20 0.00059 17.0 -0.0 74 111-187 116-192 (194)
53 >2z1m_A GDP-D-mannose dehydrat 22.5 43 0.0013 14.8 1.6 20 11-30 2-21 (178)
54 >3hkz_Y DNA-directed RNA polym 22.4 24 0.00071 16.4 0.3 27 169-195 53-79 (104)
55 >1e6c_A Shikimate kinase; phos 22.0 55 0.0016 14.1 2.1 73 111-187 94-167 (173)
56 >1ztd_A Hypothetical protein P 20.9 58 0.0017 14.0 3.9 20 168-187 79-98 (133)
57 >1w6s_A Methanol dehydrogenase 20.9 33 0.00096 15.6 0.7 14 13-26 4-17 (49)
58 >1b78_A Pyrophosphatase; struc 20.7 25 0.00074 16.3 0.1 55 4-68 57-111 (193)
59 >3fdi_A Uncharacterized protei 20.7 58 0.0017 13.9 2.6 77 111-189 117-197 (201)
60 >3js8_A Cholesterol oxidase; c 20.5 55 0.0016 14.1 1.8 25 71-95 32-56 (87)
No 1
>>3eph_A TRNA isopentenyltransferase; transferase, alternative initiation, ATP-binding, cytoplasm, mitochondrion, nucleotide-binding, nucleus; 2.95A {Saccharomyces cerevisiae} PDB: 3epj_A 3epk_A* 3epl_A* (A:1-111,A:185-343)
Probab=100.00 E-value=2.9e-34 Score=245.02 Aligned_cols=142 Identities=20% Similarity=0.281 Sum_probs=110.7
Q ss_pred CCHHHHHH-HHHHHHHHHCCCCHH-----HHHHHCCCCCCCCHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 70156999-999999853488746-----775415456777001000010786789999999777654211345677775
Q 537021.9.peg.8 74 HPSDGQRI-ARALEIKLVSGQSII-----EFWKQAPNPFIPLESAHKIIILPERSALKERIRRRFTQMLESGAIDEIRSL 147 (217)
Q Consensus 74 ~~nd~~Ri-~RaLEi~~~tGk~~s-----~~~~~~~~~~~~~~~~~~i~l~~~r~~L~~rI~~R~~~Ml~~GlieEv~~L 147 (217)
..++.... .++++-...+|+.+. -+..+.-....+.+++++|||++||+.|++||+.||+.|+++||++||+.|
T Consensus 72 ~~~~f~~~a~~~~~~i~~~~~~~IivgGt~~yl~~~~~~l~~~~~l~~~l~~~r~~L~~ri~~Rvd~M~~~Gl~~Ev~~l 151 (270)
T 3eph_A 72 YSHRFETECMNAIEDIHRRGKIPIVVGGTHYYLQTLFNKRLKFDTLFLWLYSKPEPLFQRLDDRVDDMLERGALQEIKQL 151 (270)
T ss_dssp CHHHHHHHHHHHHHHHHTTTCEEEEECSCGGGGGGGGTCSCSSEEEEEEEECCHHHHHHHHHHHHHHHHHTTHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_conf 89999999998654554045732896798615998863022212222245788788999999999999977769999999
Q ss_pred HHCC-------CCCHHHHHHCCCHHHHHHHHCCC-----CCHHHHHHHHHHHHHHHHHHHHHHHCCC------CCCCCCC
Q ss_conf 1138-------63101344206856778986789-----9989999999999998888876886288------8753116
Q 537021.9.peg.8 148 MKMN-------LSLDLPIMKAIGVRDIIALLKGE-----INYDETLQRGIIATNKYAKRQKTWLCHQ------FQADWIR 209 (217)
Q Consensus 148 ~~~~-------~~~~~~~~~~IGYke~~~yL~g~-----~~~~e~~e~~~~~Tr~yAKRQ~TWfr~~------~~~~w~~ 209 (217)
++.+ .+.+.++++||||||+.+||+|+ .++++|++.++++||||||||+|||||+ .+++|+|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~qaIGykE~~~yl~~~~~~~~~~~~e~~~~~~~~Tr~yAKrQ~tWfr~~~~~~~~~~i~~ld 231 (270)
T 3eph_A 152 YEYYSQNKFTPEQCENGVWQVIGFKEFLPWLTGKTDDNTVKLEDCIERMKTRTRQYAKRQVKWIKKMLIPDIKGDIYLLD 231 (270)
T ss_dssp HHHHTTTTCCGGGTTSGGGGSTTTGGGGGGGC-------CCHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHTTTCEEEEE
T ss_pred HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 97336565673210126887734999999973877656358999999999999999999999986434311489743047
Q ss_pred CCCHHC
Q ss_conf 983010
Q 537021.9.peg.8 210 ISSIDD 215 (217)
Q Consensus 210 ~~~~d~ 215 (217)
.++.++
T Consensus 232 ~~~~~~ 237 (270)
T 3eph_A 232 ATDLSQ 237 (270)
T ss_dssp CSCTTT
T ss_pred CHHHHH
T ss_conf 416778
No 2
>>3crm_A TRNA delta(2)-isopentenylpyrophosphate transferase; ATP-binding, nucleotide-binding, nucleotidyltransferase, tRNA processing; 1.90A {Pseudomonas aeruginosa} PDB: 3crq_A 3crr_A (A:213-296)
Probab=99.93 E-value=3.9e-26 Score=191.78 Aligned_cols=83 Identities=43% Similarity=0.667 Sum_probs=79.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CCHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 78999999977765421134567777511386-31013442068567789867899989999999999998888876886
Q 537021.9.peg.8 121 RSALKERIRRRFTQMLESGAIDEIRSLMKMNL-SLDLPIMKAIGVRDIIALLKGEINYDETLQRGIIATNKYAKRQKTWL 199 (217)
Q Consensus 121 r~~L~~rI~~R~~~Ml~~GlieEv~~L~~~~~-~~~~~~~~~IGYke~~~yL~g~~~~~e~~e~~~~~Tr~yAKRQ~TWf 199 (217)
|+.|++||+.||+.|+++||++||+.|++.+. +.+.++++||||+|+.+||+|++++++|++.++++||||||||+|||
T Consensus 1 R~~L~~ri~~Rv~~M~~~GlieEv~~l~~~~~~~~~~~~~~aIGykE~~~~l~~~~~~ee~i~~~~~~Tr~yAKrQ~tWf 80 (84)
T 3crm_A 1 RQVLHARIAQRFRQMLEQGFIAEVEALHARSDLHAGLPSIRAVGYRQVWDYLDGKLSYAEMTERGIIATRQLAKRQFTWL 80 (84)
T ss_dssp HHHHHHHHHHHHHHHHHTTHHHHHHHHHTCTTCCTTSSGGGSTTHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999998785999999874046777884655324999999985999999999999999999998999985
Q ss_pred CCCC
Q ss_conf 2888
Q 537021.9.peg.8 200 CHQF 203 (217)
Q Consensus 200 r~~~ 203 (217)
|+.+
T Consensus 81 r~~p 84 (84)
T 3crm_A 81 RSWS 84 (84)
T ss_dssp HTCS
T ss_pred CCCC
T ss_conf 8998
No 3
>>3exa_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacillus halodurans} PDB: 2qgn_A (A:201-282)
Probab=99.93 E-value=7.6e-26 Score=189.90 Aligned_cols=82 Identities=33% Similarity=0.521 Sum_probs=79.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 78999999977765421134567777511386310134420685677898678999899999999999988888768862
Q 537021.9.peg.8 121 RSALKERIRRRFTQMLESGAIDEIRSLMKMNLSLDLPIMKAIGVRDIIALLKGEINYDETLQRGIIATNKYAKRQKTWLC 200 (217)
Q Consensus 121 r~~L~~rI~~R~~~Ml~~GlieEv~~L~~~~~~~~~~~~~~IGYke~~~yL~g~~~~~e~~e~~~~~Tr~yAKRQ~TWfr 200 (217)
|+.|++||+.||+.|+++||++||+.|++. ++.+.++++||||+|+.+||+|++++++|++.++++||||||||+||||
T Consensus 1 R~~L~~rI~~Rv~~M~~~GlieEv~~l~~~-~~~~~~~~~aIGy~E~~~~l~g~~~~~ea~e~i~~~Tr~yAKRQ~tWfr 79 (82)
T 3exa_A 1 RDVLYDRINRRVDQXVEEGLIDEAKKLYDR-GIRDCQSVQAIGYKEXYDYLDGNVTLEEAIDTLKRNSRRYAKRQLTWFR 79 (82)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHHHHHHHT-TCCSSTGGGSTTTHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCCHHHHHHHHH-CCCCCCHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 577999999999999974886056778750-7753305430009999999859999999999999999999999999818
Q ss_pred CCC
Q ss_conf 888
Q 537021.9.peg.8 201 HQF 203 (217)
Q Consensus 201 ~~~ 203 (217)
+++
T Consensus 80 ~~~ 82 (82)
T 3exa_A 80 NKA 82 (82)
T ss_dssp TST
T ss_pred CCC
T ss_conf 999
No 4
>>3a8t_A Adenylate isopentenyltransferase; rossmann fold protein; HET: ATP; 2.37A {Humulus lupulus} (A:184-294)
Probab=99.93 E-value=6.6e-26 Score=190.30 Aligned_cols=86 Identities=24% Similarity=0.302 Sum_probs=80.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-------CCCHHHHHHCCCHHHHHHHHCCCCC-----------------H
Q ss_conf 899999997776542113456777751138-------6310134420685677898678999-----------------8
Q 537021.9.peg.8 122 SALKERIRRRFTQMLESGAIDEIRSLMKMN-------LSLDLPIMKAIGVRDIIALLKGEIN-----------------Y 177 (217)
Q Consensus 122 ~~L~~rI~~R~~~Ml~~GlieEv~~L~~~~-------~~~~~~~~~~IGYke~~~yL~g~~~-----------------~ 177 (217)
+.|++||+.||+.|+++||++||..|++.+ ++.+.++++||||||+.+||+|+++ +
T Consensus 2 e~L~~ri~~Rvd~Mi~~GlieEv~~l~~~~~~~~~~~~~~~~g~~qaIGykE~~~yl~~~~~~~~~~~~~~~~~~~~~~l 81 (111)
T 3a8t_A 2 KVLTDYLAKRVDDMLELGMFDELAEFYSPEDEDHDEDSATRTGLRKAIGVPEFDRYFEKFRPGDVEGEDPGRDRVRRGAF 81 (111)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHHHHCCTTCSCTTSCGGGSCGGGGSTTHHHHHHHHHHSCTTCCCCSCCTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 99999999999999986299999999862210013455422225542698999999816553110010001123557569
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 999999999999888887688628887531
Q 537021.9.peg.8 178 DETLQRGIIATNKYAKRQKTWLCHQFQADW 207 (217)
Q Consensus 178 ~e~~e~~~~~Tr~yAKRQ~TWfr~~~~~~w 207 (217)
++|++.++++||||||||+||||++++++|
T Consensus 82 ~~~ie~~~~~TrqyAKrQ~tW~r~~~~~~W 111 (111)
T 3a8t_A 82 EEAVRAIKENTCHLAKRQIGKILRLKGAGW 111 (111)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 999999999999999999999664866899
No 5
>>3foz_A TRNA delta(2)-isopentenylpyrophosphate transferase; nucleoside modification, isopentenyl-tRNA transferase, MIAA, transferase/RNA complex; 2.50A {Escherichia coli k-12} PDB: 2zxu_A* 2zm5_A (A:206-289)
Probab=99.93 E-value=1.4e-25 Score=188.22 Aligned_cols=83 Identities=46% Similarity=0.742 Sum_probs=79.5
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCCHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 6789999999777654211345677775113-863101344206856778986789998999999999999888887688
Q 537021.9.peg.8 120 ERSALKERIRRRFTQMLESGAIDEIRSLMKM-NLSLDLPIMKAIGVRDIIALLKGEINYDETLQRGIIATNKYAKRQKTW 198 (217)
Q Consensus 120 ~r~~L~~rI~~R~~~Ml~~GlieEv~~L~~~-~~~~~~~~~~~IGYke~~~yL~g~~~~~e~~e~~~~~Tr~yAKRQ~TW 198 (217)
||+.|++||+.||+.|+++||++||+.|++. +.+.+.++++||||+|+.+||+|++++++|++.++++||||||||+||
T Consensus 1 dr~~L~~ri~~Rv~~M~~~Gl~~Ev~~l~~~~~~~~~~~~~~aIGykE~~~~l~~~~~~~e~i~~~~~~Tr~yAKRQ~tW 80 (84)
T 3foz_A 1 SRELLHQRIEQRFHQMLASGFEAEVRALFARGDLHTDLPSIRCVGYRQMWSYLEGEISYDEMVYRGVCATRQLAKRQITW 80 (84)
T ss_dssp SHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHSCCCTTSTTTTSTTHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHEECHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999755789999999843554332565503699999998499999999999999999999999998
Q ss_pred HCCC
Q ss_conf 6288
Q 537021.9.peg.8 199 LCHQ 202 (217)
Q Consensus 199 fr~~ 202 (217)
||+.
T Consensus 81 fr~~ 84 (84)
T 3foz_A 81 LRGW 84 (84)
T ss_dssp HHSC
T ss_pred HCCC
T ss_conf 3899
No 6
>>3d3q_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2; 2.70A {Staphylococcus epidermidis atcc 12228} (A:207-288)
Probab=99.92 E-value=1.4e-25 Score=188.14 Aligned_cols=82 Identities=27% Similarity=0.497 Sum_probs=78.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 78999999977765421134567777511386310134420685677898678999899999999999988888768862
Q 537021.9.peg.8 121 RSALKERIRRRFTQMLESGAIDEIRSLMKMNLSLDLPIMKAIGVRDIIALLKGEINYDETLQRGIIATNKYAKRQKTWLC 200 (217)
Q Consensus 121 r~~L~~rI~~R~~~Ml~~GlieEv~~L~~~~~~~~~~~~~~IGYke~~~yL~g~~~~~e~~e~~~~~Tr~yAKRQ~TWfr 200 (217)
|++|++||+.||+.|+++||++||+.|++.+ .++.++++||||+|+.+||+|+++.++|++.++.+||||||||+||||
T Consensus 1 R~~L~~rI~~Rv~~M~~~Gli~Ev~~L~~~~-~~~~~~~~aIGy~E~~~~l~g~~~~~eai~~i~~~Tr~yAKRQ~tWfr 79 (82)
T 3d3q_A 1 RETLYLRINKRVDIXLGHGLFNEVQHLVEQG-FEASQSXQAIGYKELVPVIKGNISXENAVEKLKQHSRQYAKRQLTWFK 79 (82)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHHHHHHHTT-CTTSSGGGSTTTTTHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC-CCCCCHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 8999999999999999768669999999817-765533303279999999869999999999999999999989999828
Q ss_pred CCC
Q ss_conf 888
Q 537021.9.peg.8 201 HQF 203 (217)
Q Consensus 201 ~~~ 203 (217)
++.
T Consensus 80 ~~~ 82 (82)
T 3d3q_A 80 NKX 82 (82)
T ss_dssp HTC
T ss_pred CCC
T ss_conf 999
No 7
>>3crm_A TRNA delta(2)-isopentenylpyrophosphate transferase; ATP-binding, nucleotide-binding, nucleotidyltransferase, tRNA processing; 1.90A {Pseudomonas aeruginosa} PDB: 3crq_A 3crr_A (A:1-212,A:297-323)
Probab=99.73 E-value=5.3e-20 Score=151.67 Aligned_cols=128 Identities=26% Similarity=0.357 Sum_probs=118.1
Q ss_pred HHHHCCCCEEEECCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHH
Q ss_conf 99963994089789327999996172448899989999999999962235556655311623202357015699999999
Q 537021.9.peg.8 7 QRYKKRFLPIIVGGTGLYFRALTGQLSIMPEIPTAIREKIREKLKQYGSHILHDELSSLDSIVARQIHPSDGQRIARALE 86 (217)
Q Consensus 7 e~~~r~kiPIiVGGTglY~~all~g~~~~p~~~~~ir~~~~~~~~~~g~~~l~~~L~~~DP~~a~~i~~nd~~Ri~RaLE 86 (217)
.++.+|++||+|||||+|+.++++|.+..|..++..++.++..+...+.+.+++.|+.+||..+..+|++|.+|++|++|
T Consensus 89 ~~~~~~~~~i~~gg~~~y~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~rl~~~~~e~~~~~~~~rvir~le 168 (239)
T 3crm_A 89 KATARGRIPLLVGGTMLYYKALLEGLADMPGADPEVRAAIEAEAQAEGWEALHRQLAEVDPESAARIHPNDPQRLMRALE 168 (239)
T ss_dssp HHHHTTCEEEEEESCHHHHHHHHCCC------------------------------------------------------
T ss_pred HHHHCCCCEEEECCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHCCCCCCHHHHHHHHH
T ss_conf 55532565079733358999998399768752177888876300225799999988752503320148654899999999
Q ss_pred HHHHCCCCHHHHHHHCCCCCCCCHHHEEEEECCCHHHHHHHHHHHHHHHH
Q ss_conf 98534887467754154567770010000107867899999997776542
Q 537021.9.peg.8 87 IKLVSGQSIIEFWKQAPNPFIPLESAHKIIILPERSALKERIRRRFTQML 136 (217)
Q Consensus 87 i~~~tGk~~s~~~~~~~~~~~~~~~~~~i~l~~~r~~L~~rI~~R~~~Ml 136 (217)
++..||++++.+...+..+ +.+++++|++.+||+.|++||+.||..-.
T Consensus 169 i~~~~~~~~s~~~~~~~~~--~~~~~~~i~l~~dr~~L~~rI~~Rv~~~~ 216 (239)
T 3crm_A 169 VYRLGGVSMSDLRRRQSAE--KADFDASGRNQLPYTVAQLAIAPEQHLHW 216 (239)
T ss_dssp ---------------------------------CSEEEEEEEECSSSCEE
T ss_pred HHHHCCCCHHHHHHHCCCC--CCCCCCCCCCCCCCCEEEEEEECCCCCCE
T ss_conf 9984398778998742454--44434444568887558999837788843
No 8
>>3eph_A TRNA isopentenyltransferase; transferase, alternative initiation, ATP-binding, cytoplasm, mitochondrion, nucleotide-binding, nucleus; 2.95A {Saccharomyces cerevisiae} PDB: 3epj_A 3epk_A* 3epl_A* (A:112-184)
Probab=99.61 E-value=2.4e-16 Score=127.72 Aligned_cols=71 Identities=21% Similarity=0.281 Sum_probs=67.3
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCC
Q ss_conf 48899989999999999962235556655311623202357015699999999985348874677541545
Q 537021.9.peg.8 34 IMPEIPTAIREKIREKLKQYGSHILHDELSSLDSIVARQIHPSDGQRIARALEIKLVSGQSIIEFWKQAPN 104 (217)
Q Consensus 34 ~~p~~~~~ir~~~~~~~~~~g~~~l~~~L~~~DP~~a~~i~~nd~~Ri~RaLEi~~~tGk~~s~~~~~~~~ 104 (217)
.+|.+|+++|++++.+++..|++.||++|+++||++|++||+||++||+||||||+.||+++|+|++++++
T Consensus 2 d~P~~d~~~R~~l~~~~~~~g~~~l~~~L~~~DP~~a~~I~~nd~~Ri~RAlEi~~~TG~~~s~~~~~~~p 72 (73)
T 3eph_A 2 DTKSSERKLTRKQLDILESTDPDVIYNTLVKCDPDIATKYHPNDYRRVQRMLEIYYKTGKKPSETFNEQKI 72 (73)
T ss_dssp CCSSSCCCCCHHHHHHHTCSSSSSHHHHHHHSCHHHHTTSCTTCHHHHHHHHHHHHHHCSCHHHHHHTCCC
T ss_pred CCCCCCHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCCHHHHHCCCC
T ss_conf 33221001378898888763102321343356754010404683367889999875114640122101233
No 9
>>3exa_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacillus halodurans} PDB: 2qgn_A (A:1-200,A:283-322)
Probab=99.42 E-value=1.8e-12 Score=102.29 Aligned_cols=142 Identities=27% Similarity=0.399 Sum_probs=112.6
Q ss_pred HHH-HHHHCCCCEEEECCCCHHHHHHHCCCC-CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHH
Q ss_conf 899-999639940897893279999961724-488999899999999999622355566553116232023570156999
Q 537021.9.peg.8 4 KKL-QRYKKRFLPIIVGGTGLYFRALTGQLS-IMPEIPTAIREKIREKLKQYGSHILHDELSSLDSIVARQIHPSDGQRI 81 (217)
Q Consensus 4 k~~-e~~~r~kiPIiVGGTglY~~all~g~~-~~p~~~~~ir~~~~~~~~~~g~~~l~~~L~~~DP~~a~~i~~nd~~Ri 81 (217)
..+ +.+.+|++||++||+++|.+++..+.. ..|-+++..++.++..+...|.+.+++.|+.+||..+..++++|.+|+
T Consensus 83 ~~i~~~~~~gk~~Ii~g~~~~~~~~~~~~~~~~~i~i~~~~~~~l~~rl~~rg~~~~~~~l~ri~~~~~e~~~~~d~dri 162 (240)
T 3exa_A 83 PLITEIHERGRLPFLVGGTGLYVNAVIHQFNLGDIRADEDYRHELEAFVNSYGVQALHDKLSKIDPKAAAAIHPNNYRRV 162 (240)
T ss_dssp HHHHHHHHTTCEEEEESCCHHHHHHHHHTCCCCCCBCCHHHHHHHHHHHHHSCHHHHHHHHHTTCHHHHTTSCTTCHHHH
T ss_pred HHHHHHHHCCCCEEEEECHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHCCCCCHHHH
T ss_conf 99999997699818970739999999807411356663255568999998638699999998656577764287722778
Q ss_pred HHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHEEEEECCCHH--------HHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999985348874677541545677700100001078678--------99999997776542113456777751
Q 537021.9.peg.8 82 ARALEIKLVSGQSIIEFWKQAPNPFIPLESAHKIIILPERS--------ALKERIRRRFTQMLESGAIDEIRSLM 148 (217)
Q Consensus 82 ~RaLEi~~~tGk~~s~~~~~~~~~~~~~~~~~~i~l~~~r~--------~L~~rI~~R~~~Ml~~GlieEv~~L~ 148 (217)
+|++++...||+.+|.+.+....+. ..++++.|+|.+|-- ...++|..= . -+-.|-++|-..|-
T Consensus 163 i~n~ei~~at~~l~s~l~~~~~~~~-~~~d~l~~~L~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~ 234 (240)
T 3exa_A 163 IRALEIIKLTGKTVTEQARHEEETP-SPYNLVXIGLTXENVTWFDXTDVDFDKKIXEI-H-NFIAGKLEEKSKLE 234 (240)
T ss_dssp HHHHHHHHHTC---------------CCSEEEEEEEECCTEEEEECTTCCHHHHHHHH-H-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCHHHHHHHCCCCC-CCCCCEEEEEECCCCCEECCCCCCHHHHHHHH-H-HHHHHHHHCCCCCC
T ss_conf 9999877412452456554124677-65550389980669866369862789999999-9-99988874214232
No 10
>>3d3q_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2; 2.70A {Staphylococcus epidermidis atcc 12228} (A:120-181)
Probab=99.25 E-value=9.9e-13 Score=104.06 Aligned_cols=58 Identities=29% Similarity=0.517 Sum_probs=51.1
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHCCC
Q ss_conf 88999899999999999622355566553116232023570156999999999853488
Q 537021.9.peg.8 35 MPEIPTAIREKIREKLKQYGSHILHDELSSLDSIVARQIHPSDGQRIARALEIKLVSGQ 93 (217)
Q Consensus 35 ~p~~~~~ir~~~~~~~~~~g~~~l~~~L~~~DP~~a~~i~~nd~~Ri~RaLEi~~~tGk 93 (217)
.|++++++|++++. ++..|.+.||+.|+++||++|++|||||++||+||||||+.|||
T Consensus 5 sP~~~~~~R~~l~~-l~~~g~~~l~~~L~~~DP~~a~~i~pnd~~Ri~RAlEV~~~TGk 62 (62)
T 3d3q_A 5 SEDKXKQVKLKLKE-LEHLNNNKLHEYLASFDKESAKDIHPNNRKRVLRAIEYYLKTKK 62 (62)
T ss_dssp CHHHHHHHHHHHHT-TSSSCHHHHHHHHHHHCHHHHHHSCTTCHHHHHHHHHHHHHHCS
T ss_pred CHHHHHHHHHHHHH-HHHCCHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHCCC
T ss_conf 23378888876545-54337799999997304788730797636789999999982377
No 11
>>3foz_A TRNA delta(2)-isopentenylpyrophosphate transferase; nucleoside modification, isopentenyl-tRNA transferase, MIAA, transferase/RNA complex; 2.50A {Escherichia coli k-12} PDB: 2zxu_A* 2zm5_A (A:1-205,A:290-316)
Probab=99.08 E-value=1.7e-09 Score=82.85 Aligned_cols=112 Identities=33% Similarity=0.571 Sum_probs=96.6
Q ss_pred HHHHCCCCEEEECCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHH
Q ss_conf 99963994089789327999996172448899989999999999962235556655311623202357015699999999
Q 537021.9.peg.8 7 QRYKKRFLPIIVGGTGLYFRALTGQLSIMPEIPTAIREKIREKLKQYGSHILHDELSSLDSIVARQIHPSDGQRIARALE 86 (217)
Q Consensus 7 e~~~r~kiPIiVGGTglY~~all~g~~~~p~~~~~ir~~~~~~~~~~g~~~l~~~L~~~DP~~a~~i~~nd~~Ri~RaLE 86 (217)
..+..++.++++||+++|..+++.|+...+..++..+............+.++++|...+++.+.+++++|.+|+.|++|
T Consensus 94 ~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~rl~~~~~e~~~~i~~~~~~~~~~~~e 173 (232)
T 3foz_A 94 DITAAGRIPLLVGGTMLYFKALLEGLSPLPSADPEVRARIEQQAAEQGWESLHRQLQEVDPVAAARIHPNDPQRLSRALE 173 (232)
T ss_dssp HHHHTTCEEEEEESCHHHHHHHHSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHSCTTCHHHHHHHHH
T ss_pred HHHHCCCCEEEECCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHCCCCCHHHHHHHHH
T ss_conf 99965997089757269999998498778999888888887667742999999999873979884058776889999999
Q ss_pred HHHHCCCCHHHHHHHCCCCCCCCHHHEEEEECCC
Q ss_conf 9853488746775415456777001000010786
Q 537021.9.peg.8 87 IKLVSGQSIIEFWKQAPNPFIPLESAHKIIILPE 120 (217)
Q Consensus 87 i~~~tGk~~s~~~~~~~~~~~~~~~~~~i~l~~~ 120 (217)
++..++++++++..+.... ..++..+++++++
T Consensus 174 ~~~~~~k~~s~~~~e~~~~--~~~d~iiv~~~~~ 205 (232)
T 3foz_A 174 VFFISGKTLTELTQTSGDA--LPYQVHQFAIAPA 205 (232)
T ss_dssp HHHHHSSCHHHHHTSCCCC--CSSEEEEEEEECS
T ss_pred HHHHHCCCHHHHHHCCCCC--CCCCCCEEEEECC
T ss_conf 9997078778987323788--9876545886179
No 12
>>2ze6_A Isopentenyl transferase; crown GALL tumor, cytokinin biosynthesis, plasmid; HET: DST AMP; 2.10A {Agrobacterium tumefaciens} PDB: 2ze5_A* 2ze7_A* 2ze8_A (A:1-125)
Probab=96.58 E-value=0.00088 Score=45.50 Aligned_cols=35 Identities=11% Similarity=-0.032 Sum_probs=29.2
Q ss_pred HHHHCCCCEEEECCCCHHHHHHHCCCCCCCCCCHH
Q ss_conf 99963994089789327999996172448899989
Q 537021.9.peg.8 7 QRYKKRFLPIIVGGTGLYFRALTGQLSIMPEIPTA 41 (217)
Q Consensus 7 e~~~r~kiPIiVGGTglY~~all~g~~~~p~~~~~ 41 (217)
.++.+|++||+||||++|+++++.+.+..|..+..
T Consensus 85 ~~~~~g~~~ilv~gt~~~~~~i~~~~ps~~~l~~~ 119 (125)
T 2ze6_A 85 DWRKSEEGLILEGGSISLLNCMAKSPFWRSGFQWH 119 (125)
T ss_dssp HTTTTSSEEEEEECCHHHHHHHHHCTTTTSSCEEE
T ss_pred HHHHCCCCEEEECCCHHHHHHHHCCCCCCCCCCHH
T ss_conf 99966998899888199999998298567777889
No 13
>>3d3q_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2; 2.70A {Staphylococcus epidermidis atcc 12228} (A:1-119,A:196-206,A:289-340)
Probab=96.53 E-value=0.0032 Score=41.83 Aligned_cols=29 Identities=34% Similarity=0.603 Sum_probs=26.3
Q ss_pred HHHHCCCCEEEECCCCHHHHHHHCCCCCC
Q ss_conf 99963994089789327999996172448
Q 537021.9.peg.8 7 QRYKKRFLPIIVGGTGLYFRALTGQLSIM 35 (217)
Q Consensus 7 e~~~r~kiPIiVGGTglY~~all~g~~~~ 35 (217)
+++.+++.||+||||++|+++++.|+.++
T Consensus 91 ~i~~~~k~~IivgGs~~yL~allqGl~~l 119 (182)
T 3d3q_A 91 DITRRGKVPIIAGGTGLYIQSLLYNYAFE 119 (182)
T ss_dssp HHHHTTCEEEEECCCHHHHHHHHBCSCCC
T ss_pred HHHHCCCCEEEECCHHHHHHHHHCCCCCC
T ss_conf 99964996389746699999998387655
No 14
>>3a8t_A Adenylate isopentenyltransferase; rossmann fold protein; HET: ATP; 2.37A {Humulus lupulus} (A:1-183,A:295-339)
Probab=96.52 E-value=0.0011 Score=44.82 Aligned_cols=74 Identities=20% Similarity=0.157 Sum_probs=48.7
Q ss_pred HHHHHHCCCCEEEECCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHH
Q ss_conf 99999639940897893279999961724488999899999999999622355566553116232023570156999999
Q 537021.9.peg.8 5 KLQRYKKRFLPIIVGGTGLYFRALTGQLSIMPEIPTAIREKIREKLKQYGSHILHDELSSLDSIVARQIHPSDGQRIARA 84 (217)
Q Consensus 5 ~~e~~~r~kiPIiVGGTglY~~all~g~~~~p~~~~~ir~~~~~~~~~~g~~~l~~~L~~~DP~~a~~i~~nd~~Ri~Ra 84 (217)
..+++++|++||+|||+++|+++++.++.. -+++..++.++..+...|.+ .||.. .++++||.+||- |
T Consensus 123 ~~~i~~~g~~vii~gg~~~~~~a~~~~~~i--fi~p~~~e~L~~RL~~Rg~e--------~~~~~-~~~~~~~~~~~~-~ 190 (228)
T 3a8t_A 123 VSEITGRRKLPVLVGGSNSFIHALLVDRFD--SSGPGVFEEGSHSVVSSELR--------YDCCF-LWVDVSDLRRLD-A 190 (228)
T ss_dssp HHHHHHTTCEEEEECCCHHHHHHHHBSSCC--TTCC-------------CBS--------SEEEE-EEEECCCEEEEE-C
T ss_pred HHHHHHCCCCEEEECCCCHHHHHHHCCCCC--CCCHHHHHHHCCHHHHHHHC--------CCEEE-EEECCCCEEEEE-C
T ss_conf 889984899608975720688888638788--88978998743034444431--------66248-984499733540-5
Q ss_pred HHHHHH
Q ss_conf 999853
Q 537021.9.peg.8 85 LEIKLV 90 (217)
Q Consensus 85 LEi~~~ 90 (217)
-|+|+.
T Consensus 191 ~~~~~~ 196 (228)
T 3a8t_A 191 TESFRA 196 (228)
T ss_dssp HHHHHH
T ss_pred CCHHHH
T ss_conf 420344
No 15
>>2ze6_A Isopentenyl transferase; crown GALL tumor, cytokinin biosynthesis, plasmid; HET: DST AMP; 2.10A {Agrobacterium tumefaciens} PDB: 2ze5_A* 2ze7_A* 2ze8_A (A:126-253)
Probab=93.75 E-value=0.52 Score=27.36 Aligned_cols=79 Identities=19% Similarity=0.253 Sum_probs=61.0
Q ss_pred CHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHCCCCCHHHHHHCC-CHHHHHHHHC-CCC-----------CHHHHH
Q ss_conf 678999999977765421-----1345677775113863101344206-8567789867-899-----------989999
Q 537021.9.peg.8 120 ERSALKERIRRRFTQMLE-----SGAIDEIRSLMKMNLSLDLPIMKAI-GVRDIIALLK-GEI-----------NYDETL 181 (217)
Q Consensus 120 ~r~~L~~rI~~R~~~Ml~-----~GlieEv~~L~~~~~~~~~~~~~~I-GYke~~~yL~-g~~-----------~~~e~~ 181 (217)
|++.--.+-.+||.+||. .++++|...+.+. ....+++..| ||+.++.|=. ..+ -+++++
T Consensus 2 d~e~F~arAk~Rv~qML~p~~~~pSLL~EL~~lW~~--p~~rpiledIdGYR~~i~fa~~~~i~~d~L~~ld~~~~~~Li 79 (128)
T 2ze6_A 2 DSDAFLTRAKQRVAEMFAIREDRPSLLEELAELWNY--PAARPILEDIDGYRCAIRFARKHDLAISQLPNIDAGRHVELI 79 (128)
T ss_dssp CHHHHHHHHHHHHHHHHCCCSSSCCHHHHHHHHHTS--TTHHHHHTTSTTHHHHHHHHHHHTCCGGGGGGCCTTHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC--HHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf 446789999899998506660158999999987288--134434320222268999998716887788877657899999
Q ss_pred HHHHHHHHHHHHHHHHHHC
Q ss_conf 9999999988888768862
Q 537021.9.peg.8 182 QRGIIATNKYAKRQKTWLC 200 (217)
Q Consensus 182 e~~~~~Tr~yAKRQ~TWfr 200 (217)
..|...=..+|..|-.=|-
T Consensus 80 ~gIA~EY~~HA~~QEq~Fp 98 (128)
T 2ze6_A 80 EAIANEYLEHALSQERDFP 98 (128)
T ss_dssp HHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHHH
T ss_conf 8899999999999886457
No 16
>>3fhg_A Mjogg, N-glycosylase/DNA lyase, DNA-; helix-hairpin-helix, 8-oxoguanine, 8-OXOG, ssogg, DNA damage, DNA repair, glycosidase, hydrolase; 1.90A {Sulfolobus solfataricus} (A:1-28,A:102-142)
Probab=69.40 E-value=6.4 Score=20.22 Aligned_cols=52 Identities=19% Similarity=0.358 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC--CH-HHHHHCCCHHHHHHHHCC
Q ss_conf 89999999777654211345677775113863--10-134420685677898678
Q 537021.9.peg.8 122 SALKERIRRRFTQMLESGAIDEIRSLMKMNLS--LD-LPIMKAIGVRDIIALLKG 173 (217)
Q Consensus 122 ~~L~~rI~~R~~~Ml~~GlieEv~~L~~~~~~--~~-~~~~~~IGYke~~~yL~g 173 (217)
+..+.|+-.|+++.--+.+-+..+.+.+.... .+ +--.++|||||+-.||.+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~ik~i~~~d~~eaRe~LvniKGiGyKEASHFLRN 63 (69)
T 3fhg_A 9 PKVRARVLERVDEFRLNNLSEEIKPLADEDQQLARERLLNIKGIGMQEASHFLRN 63 (69)
T ss_dssp HHHHHHHHHHHHHHHHHHTSHHHHHHHHHCHHHHHHHHTTSTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf 6889999999987556788651010004880899999996758539999999998
No 17
>>1xfk_A Formimidoylglutamase; formiminoglutamase protein, vibrio cholerae O1 biovar eltor, structure genomics, protein structure initiative, MCSG; 1.80A {Vibrio cholerae} (A:)
Probab=47.09 E-value=14 Score=17.97 Aligned_cols=30 Identities=20% Similarity=0.141 Sum_probs=21.7
Q ss_pred HHHHHHHHCCCCEEEECCCCHHHHHHHCCC
Q ss_conf 689999963994089789327999996172
Q 537021.9.peg.8 3 SKKLQRYKKRFLPIIVGGTGLYFRALTGQL 32 (217)
Q Consensus 3 ~k~~e~~~r~kiPIiVGGTglY~~all~g~ 32 (217)
.+..+.+++|++||++||.+.=--+.+.++
T Consensus 108 ~~~~~~l~~~~~pi~iGGdhsis~g~~~al 137 (336)
T 1xfk_A 108 AQVIQQALPHARAIVLGGGHEIAWATFQGL 137 (336)
T ss_dssp HHHHHHHTTTCCEEEECSSTTHHHHHHHHH
T ss_pred HHHHHHHHCCCCEEEECCCCCCCHHHHHHH
T ss_conf 999998721696389778766622778999
No 18
>>1hsk_A UDP-N-acetylenolpyruvoylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP, flavoprotein, FAD; HET: FAD; 2.30A {Staphylococcus aureus} (A:1-99,A:305-326)
Probab=44.65 E-value=11 Score=18.70 Aligned_cols=28 Identities=7% Similarity=0.176 Sum_probs=17.5
Q ss_pred HHCCCCCHHHHHHHHHHHHHHHCCCCHH
Q ss_conf 2023570156999999999853488746
Q 537021.9.peg.8 69 VARQIHPSDGQRIARALEIKLVSGQSII 96 (217)
Q Consensus 69 ~a~~i~~nd~~Ri~RaLEi~~~tGk~~s 96 (217)
...-+-|.+.-=|..++.++...+.++.
T Consensus 49 p~avV~P~s~eeV~~iv~~a~~~~ipv~ 76 (121)
T 1hsk_A 49 ADFYITPTKNEEVQAVVKYAYQNEIPVT 76 (121)
T ss_dssp EEEEECCSSHHHHHHHHHHHHHTTCCEE
T ss_pred EEEEEEECCHHHHHHHHHHHHHCCCCEE
T ss_conf 7899976999999999999987599889
No 19
>>1gq6_A Proclavaminate amidino hydrolase; clavaminic, PAH, arginase, antibiotic; 1.75A {Streptomyces clavuligerus} (A:)
Probab=43.68 E-value=14 Score=17.94 Aligned_cols=27 Identities=15% Similarity=0.015 Sum_probs=19.1
Q ss_pred HHHHHHCCCCEEEECCCCHHHHHHHCC
Q ss_conf 999996399408978932799999617
Q 537021.9.peg.8 5 KLQRYKKRFLPIIVGGTGLYFRALTGQ 31 (217)
Q Consensus 5 ~~e~~~r~kiPIiVGGTglY~~all~g 31 (217)
..+++++|++||++||.+-=--.++.+
T Consensus 104 v~~~~~~g~~piviGGdhs~s~~~~~a 130 (313)
T 1gq6_A 104 LSGLLKANAAFLMIGGDHSLTVAALRA 130 (313)
T ss_dssp HHHHHHHSSEEEEEESCGGGHHHHHHH
T ss_pred HHHHHHCCCCEEEECCCCCCCCCHHHH
T ss_conf 999984587235514755421001134
No 20
>>2yvu_A Probable adenylyl-sulfate kinase; transferase, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.10A {Aeropyrum pernix K1} (A:)
Probab=42.26 E-value=25 Score=16.32 Aligned_cols=71 Identities=7% Similarity=0.030 Sum_probs=46.4
Q ss_pred HHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHH
Q ss_conf 10000107867899999997776542113456777751138631013442068567789867899989999999999998
Q 537021.9.peg.8 111 SAHKIIILPERSALKERIRRRFTQMLESGAIDEIRSLMKMNLSLDLPIMKAIGVRDIIALLKGEINYDETLQRGIIATNK 190 (217)
Q Consensus 111 ~~~~i~l~~~r~~L~~rI~~R~~~Ml~~GlieEv~~L~~~~~~~~~~~~~~IGYke~~~yL~g~~~~~e~~e~~~~~Tr~ 190 (217)
....++|.++.+++.+|+..|-..-...+-++..............+.+. ..+...+.+++.+.+...-++
T Consensus 113 ~~~~i~l~~~~e~~~~R~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------i~~~~~~~~e~~~~I~~~i~~ 183 (186)
T 2yvu_A 113 PFLEIYVKASLEEVIRRDPKGLYKKALKGELENFTGITDPYEPPENPQLV---------LDTESNTIEHNVSYLYSLVKA 183 (186)
T ss_dssp CEEEEEEECCHHHHHHHCHHHHHHHHHTTCCSSCHHHHSCCCCCSSCSEE---------EETTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHCCCCHHHHHHHHHCCCCHHCCHHHHHHHHHHCCCCCCCCCCCCEE---------EECCCCCHHHHHHHHHHHHHH
T ss_conf 12210012104677765212200000245555466402256787899689---------979999999999999999999
No 21
>>2a0m_A Arginase superfamily protein; structural genomics, PSI, protein structure initiative, structural genomics of pathogenic protozoa consortium; 1.60A {Trypanosoma cruzi} (A:)
Probab=38.32 E-value=23 Score=16.53 Aligned_cols=29 Identities=14% Similarity=0.233 Sum_probs=19.7
Q ss_pred HHH-HHHHCCCCEEEECCCCHHHHHHHCCC
Q ss_conf 899-99963994089789327999996172
Q 537021.9.peg.8 4 KKL-QRYKKRFLPIIVGGTGLYFRALTGQL 32 (217)
Q Consensus 4 k~~-e~~~r~kiPIiVGGTglY~~all~g~ 32 (217)
+.+ +++++|.+||++||.+----+++.++
T Consensus 103 ~~v~~~~~~~~~pi~lGGdhsis~~~~~a~ 132 (316)
T 2a0m_A 103 SKVFTVLARGAFPFVIGGGNDQSAPNGRAM 132 (316)
T ss_dssp HHHHHHHHTTCEEEEEESCGGGHHHHHHHH
T ss_pred HHHHHHHHCCCEEEEEECCCCCCHHHHHHH
T ss_conf 999999968990578625865105666777
No 22
>>2aeb_A Arginase 1; hydrolase, binuclear manganese cluster, boronic acid inhibitor, perfectly twinned crystal; HET: AB5; 1.29A {Homo sapiens} (A:)
Probab=37.21 E-value=19 Score=17.08 Aligned_cols=28 Identities=11% Similarity=0.070 Sum_probs=21.0
Q ss_pred HHHHHHCCCCEEEECCCCHHHHHHHCCC
Q ss_conf 9999963994089789327999996172
Q 537021.9.peg.8 5 KLQRYKKRFLPIIVGGTGLYFRALTGQL 32 (217)
Q Consensus 5 ~~e~~~r~kiPIiVGGTglY~~all~g~ 32 (217)
..+.+.+|++||++||-+----+.+.++
T Consensus 84 v~~~~~~~~~pi~lGGdhsis~~~~~al 111 (322)
T 2aeb_A 84 VAEVKKNGRISLVLGGDHSLAIGSISGH 111 (322)
T ss_dssp HHHHHHTTCEEEEEESCGGGHHHHHHHH
T ss_pred HHHHHHCCCEEEEECCCCCCHHHHHHHH
T ss_conf 9999867974789558876227778888
No 23
>>1woh_A Agmatinase; alpha/beta fold, hydrolase; 1.75A {Deinococcus radiodurans} (A:)
Probab=36.76 E-value=23 Score=16.64 Aligned_cols=29 Identities=17% Similarity=0.198 Sum_probs=23.3
Q ss_pred HHHHCCCCEEEECCCCHHHHHHHCCCCCC
Q ss_conf 99963994089789327999996172448
Q 537021.9.peg.8 7 QRYKKRFLPIIVGGTGLYFRALTGQLSIM 35 (217)
Q Consensus 7 e~~~r~kiPIiVGGTglY~~all~g~~~~ 35 (217)
+++++|++||++||-+.---.++.++...
T Consensus 106 ~~~~~g~~pi~lGGdhs~s~~~~~al~~~ 134 (305)
T 1woh_A 106 QVRGRCRVPVFLGGDHSVSYPLLRAFADV 134 (305)
T ss_dssp HHHTTEEEEEEEESSGGGHHHHHGGGTTS
T ss_pred HHHCCCCEEECCCCCCCCCHHHHHHHHHC
T ss_conf 66317856211366666425799987523
No 24
>>1pq3_A Arginase II, mitochondrial precursor; biosynthetic protein, hydrolase; HET: S2C; 2.70A {Homo sapiens} (A:)
Probab=35.39 E-value=21 Score=16.78 Aligned_cols=29 Identities=7% Similarity=0.025 Sum_probs=22.1
Q ss_pred HHHHHHCCCCEEEECCCCHHHHHHHCCCC
Q ss_conf 99999639940897893279999961724
Q 537021.9.peg.8 5 KLQRYKKRFLPIIVGGTGLYFRALTGQLS 33 (217)
Q Consensus 5 ~~e~~~r~kiPIiVGGTglY~~all~g~~ 33 (217)
..+.+.+|++||++||.+.---+++.++.
T Consensus 80 v~~~~~~~~~pi~lGGdhs~s~~~~~al~ 108 (306)
T 1pq3_A 80 VSRAVSDGYSCVTLGGDHSLAIGTISGHA 108 (306)
T ss_dssp HHHHHHTTCEEEEEESSGGGHHHHHHHHH
T ss_pred HHHHHHCCCCEEEECCCCCCCCCHHHHHH
T ss_conf 99999689942674578765400489999
No 25
>>3lhl_A Putative agmatinase; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.30A {Clostridium difficile} (A:)
Probab=35.27 E-value=27 Score=16.13 Aligned_cols=26 Identities=15% Similarity=0.243 Sum_probs=19.7
Q ss_pred HHHHCCCCEEEECCCCHHHHHHHCCC
Q ss_conf 99963994089789327999996172
Q 537021.9.peg.8 7 QRYKKRFLPIIVGGTGLYFRALTGQL 32 (217)
Q Consensus 7 e~~~r~kiPIiVGGTglY~~all~g~ 32 (217)
+++++|++||+.||.+.---+++.++
T Consensus 83 ~~~~~~~~pi~lGGdhs~s~~~~~a~ 108 (287)
T 3lhl_A 83 KIVRDSKVPFXIGGEHLVTLPAFKAV 108 (287)
T ss_dssp HHHHTTCEEEEEESSGGGHHHHHHHH
T ss_pred HHHHCCCEEEEECCCCCCCHHHHHHH
T ss_conf 99967986899778652328889999
No 26
>>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri} (A:86-215)
Probab=34.76 E-value=8.3 Score=19.48 Aligned_cols=12 Identities=8% Similarity=0.022 Sum_probs=4.8
Q ss_pred HHHHHHHCCHHH
Q ss_conf 566553116232
Q 537021.9.peg.8 58 LHDELSSLDSIV 69 (217)
Q Consensus 58 l~~~L~~~DP~~ 69 (217)
+.+...+.+|..
T Consensus 50 l~~~~~~~~~d~ 61 (130)
T 3ezx_A 50 VVEEAAKHKGEK 61 (130)
T ss_dssp HHHHHHHTTTSC
T ss_pred HHHHHHHCCCCE
T ss_conf 999999819880
No 27
>>2exr_A Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin oxidase/dehydrogenase, CKX, structural genomics, protein structure initiative; HET: MSE FAD; 1.70A {Arabidopsis thaliana} PDB: 2q4w_A* (A:1-115)
Probab=32.12 E-value=25 Score=16.37 Aligned_cols=31 Identities=16% Similarity=0.142 Sum_probs=18.7
Q ss_pred CHHHHCCCCCHHHHHHHHHHHHHH-HCCCCHH
Q ss_conf 623202357015699999999985-3488746
Q 537021.9.peg.8 66 DSIVARQIHPSDGQRIARALEIKL-VSGQSII 96 (217)
Q Consensus 66 DP~~a~~i~~nd~~Ri~RaLEi~~-~tGk~~s 96 (217)
++..+.-+-|.+..-|.+++.++. ..|.+++
T Consensus 59 ~~~P~~Vv~P~~~~eV~~~v~~~~~~~~i~i~ 90 (115)
T 2exr_A 59 CVKPLAVVRPVGPEDIAGAVKAALRSDKLTVA 90 (115)
T ss_dssp CCCCSEEEECSSHHHHHHHHHHHHHSSSCCEE
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHHCCCCEEE
T ss_conf 13525799619999999999999972890499
No 28
>>3h0k_A UPF0200 protein SSO1041; adenylate, kinase, structural genomics, PSI-2, protein structure initiative; 3.25A {Sulfolobus solfataricus} (A:)
Probab=31.83 E-value=21 Score=16.80 Aligned_cols=74 Identities=15% Similarity=0.120 Sum_probs=42.9
Q ss_pred HHEEEEECCCHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf 1000010786789999999777654211---3456777751138631013442068567789867899989999999999
Q 537021.9.peg.8 111 SAHKIIILPERSALKERIRRRFTQMLES---GAIDEIRSLMKMNLSLDLPIMKAIGVRDIIALLKGEINYDETLQRGIIA 187 (217)
Q Consensus 111 ~~~~i~l~~~r~~L~~rI~~R~~~Ml~~---GlieEv~~L~~~~~~~~~~~~~~IGYke~~~yL~g~~~~~e~~e~~~~~ 187 (217)
....++|.+|.+.+.+|+..|-...-.. .+.+......+... ........-.+++..+.+++.+.+...
T Consensus 101 ~~~~i~l~~~~e~~~~R~~~R~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~d~vid~~~~~e~~~~~i~~~ 172 (178)
T 3h0k_A 101 SVYIVAVHSPPKIRYKRMIERLRSDDSKEISELIRRDREELKLGI--------GEVIAMADYIITNDSNYEEFKRRCEEV 172 (178)
T ss_dssp CEEEEEEECCHHHHHHHHHTCC----CCSHHHHHHHHHHHHHHTH--------HHHHHTCSEEEECSSCHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCH--------HHHHHHCCEEEECCCCHHHHHHHHHHH
T ss_conf 223202578899999999974158610009999999998762587--------899987999998999999999999999
Q ss_pred HHHHH
Q ss_conf 99888
Q 537021.9.peg.8 188 TNKYA 192 (217)
Q Consensus 188 Tr~yA 192 (217)
.+++-
T Consensus 173 l~~~l 177 (178)
T 3h0k_A 173 TDRVL 177 (178)
T ss_dssp HHTTC
T ss_pred HHHHC
T ss_conf 99970
No 29
>>1qf9_A UMP/CMP kinase, protein (uridylmonophosphate/cytidylmonophosphate kinase); nucleoside monophosphate kinase, NMP kinase; HET: ADP C5P; 1.70A {Dictyostelium discoideum} (A:)
Probab=31.56 E-value=27 Score=16.12 Aligned_cols=78 Identities=6% Similarity=-0.013 Sum_probs=45.4
Q ss_pred HHEEEEECCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHCCCCCHHHHHHCCCHHHHHH--HHCCCCCHHHHHHHHHHH
Q ss_conf 1000010786789999999777654211345-6777751138631013442068567789--867899989999999999
Q 537021.9.peg.8 111 SAHKIIILPERSALKERIRRRFTQMLESGAI-DEIRSLMKMNLSLDLPIMKAIGVRDIIA--LLKGEINYDETLQRGIIA 187 (217)
Q Consensus 111 ~~~~i~l~~~r~~L~~rI~~R~~~Ml~~Gli-eEv~~L~~~~~~~~~~~~~~IGYke~~~--yL~g~~~~~e~~e~~~~~ 187 (217)
....+++.++.+.+.+|+..|-.......-. +..+..++.......+.. -.|++... .+++..+.++..+.+...
T Consensus 111 ~~~~i~l~~~~e~~~~R~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~id~~~~~eev~~~I~~~ 188 (194)
T 1qf9_A 111 TKFVLFFDCPEEVMTQRLLKRGESSGRSDDNIESIKKRFNTFNVQTKLVI--DHYNKFDKVKIIPANRDVNEVYNDVENL 188 (194)
T ss_dssp EEEEEEEECCHHHHHHHHHHHHTTSCCTTCSHHHHHHHHHHHHHTHHHHH--HHHHHTTCEEEEECSSCHHHHHHHHHHH
T ss_pred CCEEEEEECCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH--HHHHHCCCEEEEECCCCHHHHHHHHHHH
T ss_conf 66799831899999999985356456778858999999999999999999--9998379989996989999999999999
Q ss_pred HHH
Q ss_conf 998
Q 537021.9.peg.8 188 TNK 190 (217)
Q Consensus 188 Tr~ 190 (217)
..+
T Consensus 189 l~~ 191 (194)
T 1qf9_A 189 FKS 191 (194)
T ss_dssp HHH
T ss_pred HHH
T ss_conf 987
No 30
>>2cev_A Protein (arginase); enzyme, hydrolase, arginine hydrolysis, nitrogen metabolism, manganese metalloenzyme; 2.15A {Bacillus caldovelox} (A:)
Probab=30.47 E-value=36 Score=15.30 Aligned_cols=27 Identities=15% Similarity=0.204 Sum_probs=19.7
Q ss_pred HHHHHCCCCEEEECCCCHHHHHHHCCC
Q ss_conf 999963994089789327999996172
Q 537021.9.peg.8 6 LQRYKKRFLPIIVGGTGLYFRALTGQL 32 (217)
Q Consensus 6 ~e~~~r~kiPIiVGGTglY~~all~g~ 32 (217)
.+.+.+|.+||++||.+-=.-+++.++
T Consensus 83 ~~~~~~~~~pi~lGGdhs~s~~~i~al 109 (299)
T 2cev_A 83 DQVVQRGRFPLVLGGDHSIAIGTLAGV 109 (299)
T ss_dssp HHHHHTTCEEEEEESSGGGHHHHHHHH
T ss_pred HHHHHCCCEEEEECCCCCCCCCCCCCH
T ss_conf 999967983688257764133432110
No 31
>>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus VF5} (A:137-298)
Probab=28.83 E-value=41 Score=14.92 Aligned_cols=21 Identities=24% Similarity=0.101 Sum_probs=13.2
Q ss_pred CEEEECCCCHHHHHHHCCCCC
Q ss_conf 408978932799999617244
Q 537021.9.peg.8 14 LPIIVGGTGLYFRALTGQLSI 34 (217)
Q Consensus 14 iPIiVGGTglY~~all~g~~~ 34 (217)
.-|.+|||--.+-++..+...
T Consensus 72 ~~ig~gGt~r~la~l~~~~~~ 92 (162)
T 1t6c_A 72 TIVGLGGTITTLAALEYNVYP 92 (162)
T ss_dssp EEEEESHHHHHHHHHHTTCCS
T ss_pred EEEEECCCHHHHHHHHHHHCC
T ss_conf 699953744658888754134
No 32
>>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} (A:1-104,A:216-245)
Probab=28.15 E-value=42 Score=14.84 Aligned_cols=14 Identities=29% Similarity=0.418 Sum_probs=5.2
Q ss_pred HCCCCEEEECCCCH
Q ss_conf 63994089789327
Q 537021.9.peg.8 10 KKRFLPIIVGGTGL 23 (217)
Q Consensus 10 ~r~kiPIiVGGTgl 23 (217)
.++++|+|+|=||+
T Consensus 66 ~~~g~plViGTTG~ 79 (134)
T 1p9l_A 66 IDNGIHAVVGTTGF 79 (134)
T ss_dssp HHTTCEEEECCCCC
T ss_pred HHCCCEEEEECCCC
T ss_conf 97293799989987
No 33
>>1zr6_A Glucooligosaccharide oxidase; alpha + beta, flavoenzyme, oxidoreductase; HET: NAG FAD; 1.55A {Acremonium strictum} PDB: 2axr_A* 3e0t_A* 3hsu_A* (A:1-95)
Probab=27.73 E-value=29 Score=15.91 Aligned_cols=31 Identities=29% Similarity=0.233 Sum_probs=21.5
Q ss_pred CHHHHCCCCCHHHHHHHHHHHHHHHCCCCHH
Q ss_conf 6232023570156999999999853488746
Q 537021.9.peg.8 66 DSIVARQIHPSDGQRIARALEIKLVSGQSII 96 (217)
Q Consensus 66 DP~~a~~i~~nd~~Ri~RaLEi~~~tGk~~s 96 (217)
++..+.-+-|.+..=|.+++.++...|.++.
T Consensus 40 ~~~P~~Vv~P~s~~eV~~vv~~~~~~~i~v~ 70 (95)
T 1zr6_A 40 DYDPAAIAIPRSTEDIAAAVQCGLDAGVQIS 70 (95)
T ss_dssp CCCCSEEEECCSHHHHHHHHHHHHHHTCCEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHHCCCEEE
T ss_conf 8995089964989999999999998797599
No 34
>>2uuu_A Alkyldihydroxyacetonephosphate synthase; rhizomelic chondrodysplasia punctata, biosynthesis of phospholipids, flavoprotein; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A* (A:77-193)
Probab=27.53 E-value=26 Score=16.18 Aligned_cols=32 Identities=13% Similarity=0.199 Sum_probs=18.6
Q ss_pred CCHHHHCCCCCHHHHHHHHHHHHHHHCCCCHH
Q ss_conf 16232023570156999999999853488746
Q 537021.9.peg.8 65 LDSIVARQIHPSDGQRIARALEIKLVSGQSII 96 (217)
Q Consensus 65 ~DP~~a~~i~~nd~~Ri~RaLEi~~~tGk~~s 96 (217)
.++..+.-+.|.+..=|..++.++...|.++.
T Consensus 58 ~~~~P~~vv~P~s~~eV~~iv~~a~~~~ipv~ 89 (117)
T 2uuu_A 58 VKNAPDLIVLPHSHEEVERLVQLAHKYNVVII 89 (117)
T ss_dssp CCCCCSEEECCCSHHHHHHHHHHHHHHTCEEE
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHHCCCCEE
T ss_conf 78998589954999999999999998799689
No 35
>>1tev_A UMP-CMP kinase; ploop, NMP binding region, LID region, conformational changes, transferase; 2.10A {Homo sapiens} (A:)
Probab=26.86 E-value=31 Score=15.75 Aligned_cols=77 Identities=13% Similarity=0.076 Sum_probs=41.2
Q ss_pred HHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHCCCCCHHHHHHCCCHHHHH--HHHCCCCCHHHHHHHHHH
Q ss_conf 0100001078678999999977765421134567-7775113863101344206856778--986789998999999999
Q 537021.9.peg.8 110 ESAHKIIILPERSALKERIRRRFTQMLESGAIDE-IRSLMKMNLSLDLPIMKAIGVRDII--ALLKGEINYDETLQRGII 186 (217)
Q Consensus 110 ~~~~~i~l~~~r~~L~~rI~~R~~~Ml~~GlieE-v~~L~~~~~~~~~~~~~~IGYke~~--~yL~g~~~~~e~~e~~~~ 186 (217)
.....|+|.++.+.+.+|+..|....-......| ....+........+... -++... -..++..+.+++.+.+..
T Consensus 113 ~~~~~i~l~~~~e~~~~R~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~e~v~~~i~~ 190 (196)
T 1tev_A 113 DVSFVLFFDCNNEICIERCLERGKSSGRSDDNRESLEKRIQTYLQSTKPIID--LYEEMGKVKKIDASKSVDEVFDEVVQ 190 (196)
T ss_dssp EEEEEEEEECCHHHHHHHHHHHHHTSSCCSCCHHHHHHHHHHHHHHHHHHHH--HHHHTTCEEEEETTSCHHHHHHHHHH
T ss_pred CCEEEEEECCCCHHEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH--HHHHCCCEEEEECCCCHHHHHHHHHH
T ss_conf 6138997448634101100356765566641078999999999999999999--99966998999899998999999999
Q ss_pred HH
Q ss_conf 99
Q 537021.9.peg.8 187 AT 188 (217)
Q Consensus 187 ~T 188 (217)
.-
T Consensus 191 ~i 192 (196)
T 1tev_A 191 IF 192 (196)
T ss_dssp HH
T ss_pred HH
T ss_conf 98
No 36
>>2waq_Q DNA-directed RNA polymerase RPO13 subunit; multi-subunit, transcription; 3.35A {Sulfolobus shibatae} PDB: 2wb1_J (Q:)
Probab=26.65 E-value=24 Score=16.43 Aligned_cols=26 Identities=35% Similarity=0.392 Sum_probs=21.2
Q ss_pred HHCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 86789998999999999999888887
Q 537021.9.peg.8 170 LLKGEINYDETLQRGIIATNKYAKRQ 195 (217)
Q Consensus 170 yL~g~~~~~e~~e~~~~~Tr~yAKRQ 195 (217)
.|+|+++.+++...+.-+-+.|.||-
T Consensus 54 Ll~gkiSieEAKk~Fed~~~~Y~K~D 79 (104)
T 2waq_Q 54 LLNGKISVDEAKRLFEDNYKDYEKRD 79 (104)
T ss_dssp TTCCSSSHHHHHHHHHHHHTTTTCCC
T ss_pred HHCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 87575339999999999899988878
No 37
>>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprotein subunit; electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} (A:1-112)
Probab=26.07 E-value=38 Score=15.15 Aligned_cols=29 Identities=7% Similarity=0.036 Sum_probs=20.2
Q ss_pred HHHCCCCCHHHHHHHHHHHHHHHCCCCHH
Q ss_conf 32023570156999999999853488746
Q 537021.9.peg.8 68 IVARQIHPSDGQRIARALEIKLVSGQSII 96 (217)
Q Consensus 68 ~~a~~i~~nd~~Ri~RaLEi~~~tGk~~s 96 (217)
..+.-+-|.+..-|..++.++...|.+++
T Consensus 56 ~P~~Vv~P~s~~dV~~iv~~a~~~~~pv~ 84 (112)
T 1wvf_A 56 APSAAVTATTVEQVQGVVKICNEHKIPIW 84 (112)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHHHTCCEE
T ss_pred CCCEEEECCCHHHHHHHHHHHHHCCCEEE
T ss_conf 88779956989999999999998798099
No 38
>>1rm6_B 4-hydroxybenzoyl-COA reductase beta subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} (B:1-216)
Probab=26.07 E-value=46 Score=14.60 Aligned_cols=28 Identities=14% Similarity=0.054 Sum_probs=20.9
Q ss_pred HHHHHHHHHCCCCEEEECCCCHHHHHHH
Q ss_conf 4689999963994089789327999996
Q 537021.9.peg.8 2 LSKKLQRYKKRFLPIIVGGTGLYFRALT 29 (217)
Q Consensus 2 ~~k~~e~~~r~kiPIiVGGTglY~~all 29 (217)
+.+..++..++.-.++.|||.++.+-=.
T Consensus 15 l~ea~~ll~~~~a~~vaGgT~l~~~~~~ 42 (216)
T 1rm6_B 15 LADAVNALAAEATLPLGAGTDLLPNLRR 42 (216)
T ss_dssp HHHHHHHTTSTTEEEESSCTTHHHHHHT
T ss_pred HHHHHHHHCCCCCEEEECCCCHHHHHHC
T ss_conf 9999998628999599757568999845
No 39
>>2q2e_A Type II DNA topoisomerase VI subunit A; DNA-binding, SPO11, ATPase; 4.00A {Methanosarcina mazei} (A:97-141,A:298-369)
Probab=25.65 E-value=36 Score=15.28 Aligned_cols=80 Identities=13% Similarity=0.106 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHEEEEECCCHHHHHHHHHHHHHHHHH------HHHHHHHHHHHH
Q ss_conf 15699999999985348874677541545677700100001078678999999977765421------134567777511
Q 537021.9.peg.8 76 SDGQRIARALEIKLVSGQSIIEFWKQAPNPFIPLESAHKIIILPERSALKERIRRRFTQMLE------SGAIDEIRSLMK 149 (217)
Q Consensus 76 nd~~Ri~RaLEi~~~tGk~~s~~~~~~~~~~~~~~~~~~i~l~~~r~~L~~rI~~R~~~Ml~------~GlieEv~~L~~ 149 (217)
...-.|+.-|||+.. ..--+++- +...+-|. +++ .+|+..|++ ..|-.|.+.+++
T Consensus 24 ~es~~~iedle~~~~--~~re~~~~----------dl~~ipLt-~~D------~kk~~~lL~~p~~~~~~W~~EL~~Ml~ 84 (117)
T 2q2e_A 24 GESDRLIEDLEILTS--LQREYFHY----------ELSTDKLT-EQD------VSALRSELSDPRFESDYWKEQIQLQLD 84 (117)
T ss_dssp TTHHHHHHHHHHHSC--CCGGGGTS----------CCCCCCCC-HHH------HHHHTTTTSSCSSCCTTTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHC--CCHHHCCC----------CCCCCCCC-HHH------HHHHHHHHCCCCCCCHHHHHHHHHHHH
T ss_conf 999999999999988--99999792----------55657589-999------999999852843277899999999998
Q ss_pred CCCCCHHHHHHCCCHHHHHH-HHCCC
Q ss_conf 38631013442068567789-86789
Q 537021.9.peg.8 150 MNLSLDLPIMKAIGVRDIIA-LLKGE 174 (217)
Q Consensus 150 ~~~~~~~~~~~~IGYke~~~-yL~g~ 174 (217)
.|...+..++.+.|...+.+ ||..+
T Consensus 85 ~~~KAEIEAL~~~g~~fl~~~YLP~K 110 (117)
T 2q2e_A 85 IGKKAEQQAFAGKGLDFVTEVYLPNR 110 (117)
T ss_dssp HCCCCCSGGGGGGCTTSTTTTHHHHH
T ss_pred HCCEEEEEHHHHCCCCCCHHHHHHHH
T ss_conf 49838876363449870088899999
No 40
>>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'- deoxyadenosine, radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} (B:95-262)
Probab=25.43 E-value=37 Score=15.25 Aligned_cols=13 Identities=0% Similarity=-0.100 Sum_probs=4.3
Q ss_pred ECCCHHHHHHHHH
Q ss_conf 0786789999999
Q 537021.9.peg.8 117 ILPERSALKERIR 129 (217)
Q Consensus 117 l~~~r~~L~~rI~ 129 (217)
.+.+.+.+-+.+.
T Consensus 71 ~~~p~e~lv~~~~ 83 (168)
T 1xrs_B 71 SQVANEDFIKKAV 83 (168)
T ss_dssp SSBCHHHHHHHHH
T ss_pred CCCCHHHHHHHHH
T ss_conf 8999999999998
No 41
>>3dyt_A Sorting nexin-9; 3-helix bundle, BAR domain, PX domain, phosphoprotein, protein transport, SH3 domain, transport, transport protein; 2.08A {Homo sapiens} PDB: 3dyu_A 2raj_A 2rai_A 2rak_A* (A:1-18,A:148-160,A:274-366)
Probab=25.16 E-value=26 Score=16.28 Aligned_cols=11 Identities=55% Similarity=0.918 Sum_probs=9.0
Q ss_pred CCCEEEECCCC
Q ss_conf 99408978932
Q 537021.9.peg.8 12 RFLPIIVGGTG 22 (217)
Q Consensus 12 ~kiPIiVGGTg 22 (217)
.+|||+||.-|
T Consensus 1 ~~~~~~~~~~~ 11 (124)
T 3dyt_A 1 EKIPIIVGDYG 11 (124)
T ss_dssp CCEEEEEETTE
T ss_pred CCEEEECCCCC
T ss_conf 95347408999
No 42
>>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} (A:1-190)
Probab=25.13 E-value=35 Score=15.37 Aligned_cols=19 Identities=26% Similarity=0.170 Sum_probs=14.4
Q ss_pred CCCEEEECCCCHHHHHHHC
Q ss_conf 9940897893279999961
Q 537021.9.peg.8 12 RFLPIIVGGTGLYFRALTG 30 (217)
Q Consensus 12 ~kiPIiVGGTglY~~all~ 30 (217)
||.-+|+||||+==.+++.
T Consensus 1 ~K~ilVtGatG~iG~~lv~ 19 (190)
T 1db3_A 1 SKVALITGVTGQDGSYLAE 19 (190)
T ss_dssp CCEEEEETTTSHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHH
T ss_conf 9889995778789999999
No 43
>>2nzw_A Alpha1,3-fucosyltransferase; FUCT, GT 10; 1.90A {Helicobacter pylori} (A:178-311)
Probab=24.86 E-value=49 Score=14.46 Aligned_cols=20 Identities=25% Similarity=0.434 Sum_probs=14.3
Q ss_pred HHHHHHHHCCCCEEEECCCC
Q ss_conf 68999996399408978932
Q 537021.9.peg.8 3 SKKLQRYKKRFLPIIVGGTG 22 (217)
Q Consensus 3 ~k~~e~~~r~kiPIiVGGTg 22 (217)
.|..+.+..|-|||..|++-
T Consensus 72 EK~~~al~~g~vPIy~G~~n 91 (134)
T 2nzw_A 72 EKIIDAYFSHTIPIYWGSPS 91 (134)
T ss_dssp THHHHHHHTTCEEEEESCTT
T ss_pred HHHHHHHHCCCEEEEECCCC
T ss_conf 47788886591789989986
No 44
>>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} (A:)
Probab=24.85 E-value=37 Score=15.27 Aligned_cols=21 Identities=19% Similarity=0.142 Sum_probs=14.9
Q ss_pred HHCCCCEEEECCCCHHHHHHH
Q ss_conf 963994089789327999996
Q 537021.9.peg.8 9 YKKRFLPIIVGGTGLYFRALT 29 (217)
Q Consensus 9 ~~r~kiPIiVGGTglY~~all 29 (217)
.-+++.-+|+|||||==.+|+
T Consensus 6 ~~~~k~VLVTGatGfiG~~lv 26 (357)
T 1rkx_A 6 FWQGKRVFVTGHTGFKGGWLS 26 (357)
T ss_dssp HHTTCEEEEETTTSHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHH
T ss_conf 579598999689978999999
No 45
>>1ffv_C CUTM, flavoprotein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} (C:1-176)
Probab=24.77 E-value=47 Score=14.53 Aligned_cols=28 Identities=11% Similarity=0.054 Sum_probs=19.0
Q ss_pred HHHHHHHH--CCCCEEEECCCCHHHHHHHC
Q ss_conf 68999996--39940897893279999961
Q 537021.9.peg.8 3 SKKLQRYK--KRFLPIIVGGTGLYFRALTG 30 (217)
Q Consensus 3 ~k~~e~~~--r~kiPIiVGGTglY~~all~ 30 (217)
.+..+..+ ....++++|||+++...=..
T Consensus 15 ~e~~~ll~~~~~~~~~vaGgT~l~~~~~~~ 44 (176)
T 1ffv_C 15 GEAVALLGQLGSDAKLLAGGHSLLPMMKLR 44 (176)
T ss_dssp HHHHHHHHHHGGGEEEESSCTTHHHHHHTT
T ss_pred HHHHHHHHHHCCCCEEEECCCCHHHHHHCC
T ss_conf 999999985199988997375689987327
No 46
>>1kht_A Adenylate kinase; phosphotransferase, signaling protein, transferase; HET: AMP; 2.50A {Methanococcus voltae} (A:)
Probab=24.52 E-value=16 Score=17.54 Aligned_cols=75 Identities=9% Similarity=-0.057 Sum_probs=41.4
Q ss_pred HHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHH--HHHHCCCCCHHHHHHHHHHHH
Q ss_conf 100001078678999999977765421134567777511386310134420685677--898678999899999999999
Q 537021.9.peg.8 111 SAHKIIILPERSALKERIRRRFTQMLESGAIDEIRSLMKMNLSLDLPIMKAIGVRDI--IALLKGEINYDETLQRGIIAT 188 (217)
Q Consensus 111 ~~~~i~l~~~r~~L~~rI~~R~~~Ml~~GlieEv~~L~~~~~~~~~~~~~~IGYke~--~~yL~g~~~~~e~~e~~~~~T 188 (217)
...+++|+++.+.+.+|+..|-.......-.+-.+...+.. ......+ ..+.+. .-..++..+.++.++.+....
T Consensus 115 ~~~~i~L~~~~e~~~~R~~~R~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~i~~~~~~~e~v~~~I~~~i 191 (192)
T 1kht_A 115 PDLIIVVETTGDEILMRRMSDETRVRDLDTASTIEQHQFMN-RCAAMSY--GVLTGATVKIVQNRNGLLDQAVEELTNVL 191 (192)
T ss_dssp CSEEEEEECCHHHHHHHHHTSSSCSSSCCCHHHHHHHHHHH-HHHHHHH--HHHHCCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCEEEEEECCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH-HHHHHHH--HHHHCCCEEEEECCCCCHHHHHHHHHHHH
T ss_conf 87489998788999999987223677850189999999999-9999999--98509987999899999899999999986
No 47
>>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} (A:1-103)
Probab=24.21 E-value=50 Score=14.38 Aligned_cols=32 Identities=13% Similarity=0.116 Sum_probs=21.9
Q ss_pred CCHHHHCCCCCHHHHHHHHHHHHHHHCCCCHH
Q ss_conf 16232023570156999999999853488746
Q 537021.9.peg.8 65 LDSIVARQIHPSDGQRIARALEIKLVSGQSII 96 (217)
Q Consensus 65 ~DP~~a~~i~~nd~~Ri~RaLEi~~~tGk~~s 96 (217)
.++..+.-+-|.+..=|...+.++...|.|+.
T Consensus 42 ~~~~P~aVv~P~s~eeV~~iv~~a~~~~ipv~ 73 (103)
T 1f0x_A 42 GQGDALAVVFPGSLLELWRVLKACVTADKIIL 73 (103)
T ss_dssp CBBCCSEEECCSSHHHHHHHHHHHHHTTCEEE
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHHCCCEEE
T ss_conf 67787679950999999999999998798299
No 48
>>2ef5_A Arginase; TTHA1496, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: LYS; 2.00A {Thermus thermophilus} PDB: 2ef4_A* 2eiv_A (A:)
Probab=24.12 E-value=22 Score=16.67 Aligned_cols=22 Identities=18% Similarity=0.323 Sum_probs=13.7
Q ss_pred HHHCCCCEEEECCCCHHHHHHH
Q ss_conf 9963994089789327999996
Q 537021.9.peg.8 8 RYKKRFLPIIVGGTGLYFRALT 29 (217)
Q Consensus 8 ~~~r~kiPIiVGGTglY~~all 29 (217)
.+++|++||+.||-+-=.-+.+
T Consensus 82 ~l~~g~~Pi~lGGdhsis~~~~ 103 (290)
T 2ef5_A 82 ALPEGVFPIVLGGDHSLSMGSV 103 (290)
T ss_dssp TSCTTEEEEEEESSGGGHHHHH
T ss_pred HHHCCCEEEEECCCCCCHHHHH
T ss_conf 8754973699668863007888
No 49
>>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} (A:280-308)
Probab=23.95 E-value=18 Score=17.32 Aligned_cols=16 Identities=25% Similarity=0.482 Sum_probs=11.5
Q ss_pred CCCHHHHHHCCCHHHH
Q ss_conf 6310134420685677
Q 537021.9.peg.8 152 LSLDLPIMKAIGVRDI 167 (217)
Q Consensus 152 ~~~~~~~~~~IGYke~ 167 (217)
+..+.+-++||||+|+
T Consensus 14 ~Pcs~~eLks~Gy~ev 29 (29)
T 2ond_A 14 YPCSASELKALGYKDV 29 (29)
T ss_dssp CSSCHHHHHTTTCCCC
T ss_pred CCCCHHHHHHHCCCCC
T ss_conf 8799999997526569
No 50
>>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} (A:1-126)
Probab=23.86 E-value=44 Score=14.72 Aligned_cols=26 Identities=4% Similarity=0.036 Sum_probs=16.1
Q ss_pred CCCCCHHHHHHHHHHHHHHHCCCCHH
Q ss_conf 23570156999999999853488746
Q 537021.9.peg.8 71 RQIHPSDGQRIARALEIKLVSGQSII 96 (217)
Q Consensus 71 ~~i~~nd~~Ri~RaLEi~~~tGk~~s 96 (217)
.-+-|.+..=|..++.++...+-+++
T Consensus 73 aVv~P~~~~eV~~ivk~a~~~~i~v~ 98 (126)
T 1e8g_A 73 AIVAPRNVADVQSIVGLANKFSFPLW 98 (126)
T ss_dssp EEECCSSHHHHHHHHHHHHHHTCCEE
T ss_pred EEEECCCHHHHHHHHHHHHHCCCCEE
T ss_conf 89966999999999999998799389
No 51
>>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} (A:)
Probab=23.07 E-value=41 Score=14.95 Aligned_cols=19 Identities=16% Similarity=0.328 Sum_probs=14.7
Q ss_pred CCCEEEECCCCHHHHHHHC
Q ss_conf 9940897893279999961
Q 537021.9.peg.8 12 RFLPIIVGGTGLYFRALTG 30 (217)
Q Consensus 12 ~kiPIiVGGTglY~~all~ 30 (217)
|+.-+|+|||||==..|+.
T Consensus 2 ~~~VLVTGatGfiG~~lv~ 20 (397)
T 1gy8_A 2 HMRVLVCGGAGYIGSHFVR 20 (397)
T ss_dssp CCEEEEETTTSHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHH
T ss_conf 8879996787389999999
No 52
>>1nks_A Adenylate kinase; thermophilic, transferase; HET: AMP ADP; 2.57A {Sulfolobus acidocaldarius} (A:)
Probab=23.03 E-value=20 Score=16.96 Aligned_cols=74 Identities=9% Similarity=-0.059 Sum_probs=40.4
Q ss_pred HHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHH---HHHHCCCCCHHHHHHHHHHH
Q ss_conf 100001078678999999977765421134567777511386310134420685677---89867899989999999999
Q 537021.9.peg.8 111 SAHKIIILPERSALKERIRRRFTQMLESGAIDEIRSLMKMNLSLDLPIMKAIGVRDI---IALLKGEINYDETLQRGIIA 187 (217)
Q Consensus 111 ~~~~i~l~~~r~~L~~rI~~R~~~Ml~~GlieEv~~L~~~~~~~~~~~~~~IGYke~---~~yL~g~~~~~e~~e~~~~~ 187 (217)
....+++.+|.+++.+|+..|-.......-.++....+....... ...+.+..- .-..++..+.++..+.+...
T Consensus 116 ~~~~i~l~~~~e~~~~R~~~r~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~i~~~~~~~e~v~~~I~~~ 192 (194)
T 1nks_A 116 PSVIFLLEADPKIILSRQKRDTTRNRNDYSDESVILETINFARYA---ATASAVLAGSTVKVIVNVEGDPSIAANEIIRS 192 (194)
T ss_dssp CSEEEEEECCHHHHHHHHHHCTTTCCCCCCSHHHHHHHHHHHHHH---HHHHHHHHTCEEEEEECCSSCHHHHHHHHHHH
T ss_pred CCCCEEEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH---HHHHHHHHCCCEEEEECCCCCHHHHHHHHHHH
T ss_conf 874347865999999999850204656652899999999999999---99999973998799989999999999999998
No 53
>>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genomics, NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus VF5} PDB: 2z95_A* (A:1-178)
Probab=22.46 E-value=43 Score=14.82 Aligned_cols=20 Identities=20% Similarity=0.007 Sum_probs=15.6
Q ss_pred CCCCEEEECCCCHHHHHHHC
Q ss_conf 39940897893279999961
Q 537021.9.peg.8 11 KRFLPIIVGGTGLYFRALTG 30 (217)
Q Consensus 11 r~kiPIiVGGTglY~~all~ 30 (217)
.||.-+|+||||+==.+++.
T Consensus 2 ~~k~vlVTGatG~iG~~l~~ 21 (178)
T 2z1m_A 2 SGKRALITGIRGQDGAYLAK 21 (178)
T ss_dssp -CCEEEEETTTSHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHH
T ss_conf 80989997888689999999
No 54
>>3hkz_Y DNA-directed RNA polymerase subunit 13; archaea, metal-binding, nucleotidyltransferase, transcription, transferase, zinc, zinc-finger; 3.40A {Sulfolobus solfataricus} (Y:)
Probab=22.41 E-value=24 Score=16.45 Aligned_cols=27 Identities=30% Similarity=0.367 Sum_probs=20.5
Q ss_pred HHHCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 986789998999999999999888887
Q 537021.9.peg.8 169 ALLKGEINYDETLQRGIIATNKYAKRQ 195 (217)
Q Consensus 169 ~yL~g~~~~~e~~e~~~~~Tr~yAKRQ 195 (217)
..|+|+++.+++...+.-+-+.|.||-
T Consensus 53 ~Ll~gkiSieEAKk~Fed~~~~Y~K~D 79 (104)
T 3hkz_Y 53 NLLNGKITLEEAKKLFEDNYKEYEKRD 79 (104)
T ss_dssp HTTCCSSHHHHHHHHHHHHHTTTTCCC
T ss_pred HHHCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 987575339999999999899988877
No 55
>>1e6c_A Shikimate kinase; phosphoryl transfer, ADP, shikimate pathway, P-loop protein, transferase; 1.8A {Erwinia chrysanthemi} (A:)
Probab=22.00 E-value=55 Score=14.10 Aligned_cols=73 Identities=5% Similarity=-0.019 Sum_probs=41.3
Q ss_pred HHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHCCCCCHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf 100001078678999999977765421134567777-51138631013442068567789867899989999999999
Q 537021.9.peg.8 111 SAHKIIILPERSALKERIRRRFTQMLESGAIDEIRS-LMKMNLSLDLPIMKAIGVRDIIALLKGEINYDETLQRGIIA 187 (217)
Q Consensus 111 ~~~~i~l~~~r~~L~~rI~~R~~~Ml~~GlieEv~~-L~~~~~~~~~~~~~~IGYke~~~yL~g~~~~~e~~e~~~~~ 187 (217)
....++|.++.+.+.+|+..|-..........|... -+...+....+.... .-.-.+++..+.+++.+.+...
T Consensus 94 ~~~~v~l~~~~e~~~~R~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~i~~~ 167 (173)
T 1e6c_A 94 HGTVVYLFAPAEELALRLQASLQAHQRPTLTGRPIAEEMEAVLREREALYQD----VAHYVVDATQPPAAIVCELMQT 167 (173)
T ss_dssp HSEEEEEECCHHHHHHHHHHHHCSCCCCCTTHHHHHHHHHHHHHHHHHHHHH----HCSEEEETTSCHHHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHH----CCEEEECCCCCHHHHHHHHHHH
T ss_conf 6718983399999999998510012577653204799999999985545550----7929995969999999999999
No 56
>>1ztd_A Hypothetical protein PFU-631545-001; structural genomics, southeast collaboratory for structural genomics, secsg; 2.00A {Pyrococcus furiosus} (A:)
Probab=20.93 E-value=58 Score=13.96 Aligned_cols=20 Identities=25% Similarity=0.072 Sum_probs=15.0
Q ss_pred HHHHCCCCCHHHHHHHHHHH
Q ss_conf 89867899989999999999
Q 537021.9.peg.8 168 IALLKGEINYDETLQRGIIA 187 (217)
Q Consensus 168 ~~yL~g~~~~~e~~e~~~~~ 187 (217)
..||+|.+|.+|++|.++.+
T Consensus 79 yAWLeG~is~eEavEil~~n 98 (133)
T 1ztd_A 79 KAWLMGLISEREAVEIIKKN 98 (133)
T ss_dssp HHHHTTSSCHHHHHHHHHTT
T ss_pred HHHHHCCCCHHHHHHHHHHC
T ss_conf 99980535199999999961
No 57
>>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} (A:53-101)
Probab=20.91 E-value=33 Score=15.59 Aligned_cols=14 Identities=21% Similarity=0.306 Sum_probs=10.2
Q ss_pred CCEEEECCCCHHHH
Q ss_conf 94089789327999
Q 537021.9.peg.8 13 FLPIIVGGTGLYFR 26 (217)
Q Consensus 13 kiPIiVGGTglY~~ 26 (217)
-.||+|||+++.--
T Consensus 4 ~tPlvv~g~lY~~t 17 (49)
T 1w6s_A 4 GAPLVVDGKMYIHT 17 (49)
T ss_dssp SCCEEETTEEEEEC
T ss_pred ECCEEECCEEEEEE
T ss_conf 19989999999940
No 58
>>1b78_A Pyrophosphatase; structural genomics, hyperthermal protein; 2.20A {Methanococcus jannaschii} (A:)
Probab=20.74 E-value=25 Score=16.34 Aligned_cols=55 Identities=20% Similarity=0.230 Sum_probs=27.7
Q ss_pred HHHHHHHCCCCEEEECCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
Q ss_conf 89999963994089789327999996172448899989999999999962235556655311623
Q 537021.9.peg.8 4 KKLQRYKKRFLPIIVGGTGLYFRALTGQLSIMPEIPTAIREKIREKLKQYGSHILHDELSSLDSI 68 (217)
Q Consensus 4 k~~e~~~r~kiPIiVGGTglY~~all~g~~~~p~~~~~ir~~~~~~~~~~g~~~l~~~L~~~DP~ 68 (217)
|....++.-..|++|=-||||++||- |+ |.+ ....-....|.+.+.+.|..++-.
T Consensus 57 KA~~~~~~~~~pvi~dDsGL~i~aL~-g~---PG~------ys~~~~~~~~~~~ll~~l~~~~~R 111 (193)
T 1b78_A 57 GAKWVYNILKKPVIVEDSGFFVEALN-GF---PGT------YSKFVQETIGNEGILKLLEGKDNR 111 (193)
T ss_dssp HHHHHHHHHCSCEEEEEEEEEEGGGT-TC---EET------THHHHHHHTHHHHHHHHHTTCSCC
T ss_pred HHHHHHHHCCCEEEECCCHHHHHHHH-HH---HHH------HHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf 89988752133278506111466775-44---456------619988757859999986410125
No 59
>>3fdi_A Uncharacterized protein; cytidylate kinase like protein, PSI, MCSG, PRK04182 class member, structural genomics; 2.20A {Eubacterium ventriosum atcc 27560} (A:)
Probab=20.70 E-value=58 Score=13.93 Aligned_cols=77 Identities=12% Similarity=0.112 Sum_probs=39.4
Q ss_pred HHEEEEECCCHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHCCCCCHHHHHHCCCHHHHHHH-H-CCCCCHHHHHHHHHH
Q ss_conf 10000107867899999997776542113456--7777511386310134420685677898-6-789998999999999
Q 537021.9.peg.8 111 SAHKIIILPERSALKERIRRRFTQMLESGAID--EIRSLMKMNLSLDLPIMKAIGVRDIIAL-L-KGEINYDETLQRGII 186 (217)
Q Consensus 111 ~~~~i~l~~~r~~L~~rI~~R~~~Ml~~Glie--Ev~~L~~~~~~~~~~~~~~IGYke~~~y-L-~g~~~~~e~~e~~~~ 186 (217)
....++|.+|.+.+.+|+..|-........-. +........+... .-..-.++....+ + ++..+.+++.+.+..
T Consensus 117 ~~~~i~l~~~~e~~~~R~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~~~I~~ 194 (201)
T 3fdi_A 117 NXISAFILGDKDTKTKRVXEREGVDEKTALNXXKKXDKXRKVYHNFY--CESKWGDSRTYDICIKIGKVDVDTATDXIIK 194 (201)
T ss_dssp TEEEEEEEECHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHH--CSSCTTBGGGCSEEEEESSSCHHHHHHHHHH
T ss_pred CCCEEEEECCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH--HCCCCCCCCCCEEEEECCCCCHHHHHHHHHH
T ss_conf 53047774899999999983658767899999999999999999986--1799555667818998979999999999999
Q ss_pred HHH
Q ss_conf 999
Q 537021.9.peg.8 187 ATN 189 (217)
Q Consensus 187 ~Tr 189 (217)
..+
T Consensus 195 ~i~ 197 (201)
T 3fdi_A 195 YID 197 (201)
T ss_dssp HHH
T ss_pred HHH
T ss_conf 998
No 60
>>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP} (A:1-87)
Probab=20.50 E-value=55 Score=14.08 Aligned_cols=25 Identities=8% Similarity=0.185 Sum_probs=11.7
Q ss_pred CCCCCHHHHHHHHHHHHHHHCCCCH
Q ss_conf 2357015699999999985348874
Q 537021.9.peg.8 71 RQIHPSDGQRIARALEIKLVSGQSI 95 (217)
Q Consensus 71 ~~i~~nd~~Ri~RaLEi~~~tGk~~ 95 (217)
.-+.|.+..=|..++.++...|.++
T Consensus 32 ~vv~P~s~~eV~~iv~~a~~~~~~v 56 (87)
T 3js8_A 32 WTCAPRSADEVVKVANWAKDNGYKV 56 (87)
T ss_dssp EEECCSSHHHHHHHHHHHHHHTCEE
T ss_pred EEEECCCHHHHHHHHHHHHHCCCEE
T ss_conf 8994699999999999999879809
Done!