HHsearch results for GI: peg_888 and protein with PDBid: 3eph_A
>3eph_A TRNA isopentenyltransferase; transferase, alternative initiation, ATP-binding, cytoplasm, mitochondrion, nucleotide-binding, nucleus; 2.95A {Saccharomyces cerevisiae} PDB: 3epj_A 3epk_A* 3epl_A*
Probab=100.00 E-value=0 Score=403.21 Aligned_cols=211 Identities=22% Similarity=0.372 Sum_probs=189.6
Q ss_pred HHHHH-HHHHCCCCEEEECCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHH
Q ss_conf 46899-99963994089789327999996172448899989999999999962235556655311623202357015699
Q 537021.9.peg.8 2 LSKKL-QRYKKRFLPIIVGGTGLYFRALTGQLSIMPEIPTAIREKIREKLKQYGSHILHDELSSLDSIVARQIHPSDGQR 80 (217)
Q Consensus 2 ~~k~~-e~~~r~kiPIiVGGTglY~~all~g~~~~p~~~~~ir~~~~~~~~~~g~~~l~~~L~~~DP~~a~~i~~nd~~R 80 (217)
+.+.| ++++||++||||||||||++||++|+++.|..++.++.+....++..|.+.+|++|+++||++|+++||||++|
T Consensus 80 a~~~i~~i~~rgk~PIiVGGT~~Yi~aLl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~vDP~~A~kihpnd~rR 159 (409)
T 3eph_A 80 CMNAIEDIHRRGKIPIVVGGTHYYLQTLFNKRVDTKSSERKLTRKQLDILESTDPDVIYNTLVKCDPDIATKYHPNDYRR 159 (409)
T ss_dssp HHHHHHHHHTTTCEEEEECSCGGGGGGGGTCSCCCSSSCCCCCHHHHHHHTCSSSSSHHHHHHHSCHHHHTTSCTTCHHH
T ss_pred HHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHCCCCHHHH
T ss_conf 99999999862896599888217999997430457410288999999998740499999998602788776349737789
Q ss_pred HHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-------
Q ss_conf 9999999853488746775415456777001000010786789999999777654211345677775113863-------
Q 537021.9.peg.8 81 IARALEIKLVSGQSIIEFWKQAPNPFIPLESAHKIIILPERSALKERIRRRFTQMLESGAIDEIRSLMKMNLS------- 153 (217)
Q Consensus 81 i~RaLEi~~~tGk~~s~~~~~~~~~~~~~~~~~~i~l~~~r~~L~~rI~~R~~~Ml~~GlieEv~~L~~~~~~------- 153 (217)
|+||||||+.||+++|+++..++.. ..+++++|++.++++.|++||+.||+.|+++||++||+.|++.+..
T Consensus 160 I~RaLei~~~tG~~~S~~~~~~~~~--~~~~~~~~~l~~~~~~L~~rI~~Rvd~Ml~~Gll~Ev~~l~~~~~~~~~~~~~ 237 (409)
T 3eph_A 160 VQRMLEIYYKTGKKPSETFNEQKIT--LKFDTLFLWLYSKPEPLFQRLDDRVDDMLERGALQEIKQLYEYYSQNKFTPEQ 237 (409)
T ss_dssp HHHHHHHHHHHCSCHHHHHHTCCCC--CSSEEEEEEEECCHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHTTTTCCGGG
T ss_pred HHHHHHHHHHCCCCHHHHHHHCCCC--CCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCC
T ss_conf 9999999981268889996420456--54112110247977889989999999999867699999999733645567210
Q ss_pred CHHHHHHCCCHHHHHHHHCCC-----CCHHHHHHHHHHHHHHHHHHHHHHHCCCC------CCCCCCCCCHH
Q ss_conf 101344206856778986789-----99899999999999988888768862888------75311698301
Q 537021.9.peg.8 154 LDLPIMKAIGVRDIIALLKGE-----INYDETLQRGIIATNKYAKRQKTWLCHQF------QADWIRISSID 214 (217)
Q Consensus 154 ~~~~~~~~IGYke~~~yL~g~-----~~~~e~~e~~~~~Tr~yAKRQ~TWfr~~~------~~~w~~~~~~d 214 (217)
.+.++++||||||+.+||+|+ +++++|++.++.+||||||||+||||+++ +++|+|.++.+
T Consensus 238 ~~~gi~qaIGykE~~~yL~g~~~~~~~~lee~ie~ik~~TrqYAKrQ~tW~r~~~~~~~~~~~~~lD~td~~ 309 (409)
T 3eph_A 238 CENGVWQVIGFKEFLPWLTGKTDDNTVKLEDCIERMKTRTRQYAKRQVKWIKKMLIPDIKGDIYLLDATDLS 309 (409)
T ss_dssp TTSGGGGSTTTGGGGGGGC-------CCHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHTTTCEEEEECSCTT
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCHHH
T ss_conf 134788884399999997487765635899999999999999999999997036652258874220651477