Query         537021.9.peg.888_1
Match_columns 217
No_of_seqs    126 out of 2919
Neff          6.8 
Searched_HMMs 23785
Date          Wed May 25 04:07:20 2011
Command       /home/congqian_1/programs/hhpred/hhsearch -i peg_888.hhm -d /home/congqian_1/database/pdb/pdb70.hhm 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 3foz_A TRNA delta(2)-isopenten 100.0       0       0  447.2  20.5  214    2-216    88-303 (316)
  2 3exa_A TRNA delta(2)-isopenten 100.0       0       0  440.3  20.4  211    2-214    81-293 (322)
  3 3crm_A TRNA delta(2)-isopenten 100.0       0       0  447.4  14.2  214    2-215    83-308 (323)
  4 3d3q_A TRNA delta(2)-isopenten 100.0       0       0  431.6  18.5  209    2-213    85-298 (340)
  5 3eph_A TRNA isopentenyltransfe 100.0       0       0  403.2  13.3  211    2-214    80-309 (409)
  6 3a8t_A Adenylate isopentenyltr 100.0 2.8E-42       0  296.5   7.9  156    2-212   119-303 (339)
  7 2ze6_A Isopentenyl transferase  99.4 1.2E-13 5.2E-18  109.0   2.9  143    5-152    83-242 (253)
  8 2a0m_A Arginase superfamily pr  49.7     6.5 0.00028   19.2   1.9   25    5-29    105-129 (316)
  9 3lu1_A WBGU; rossman fold, epi  47.3      12  0.0005   17.5   2.9   27    4-30     30-56  (364)
 10 1sxj_A Activator 1 95 kDa subu  44.6      11 0.00045   17.8   2.3   83    4-94    170-261 (516)
 11 2p4h_X Vestitone reductase; NA  44.2     6.1 0.00026   19.4   1.0   18   11-29      1-18  (322)
 12 3kb2_A SPBC2 prophage-derived   43.7      14 0.00059   17.0   2.8   67  112-186    96-162 (173)
 13 3lhl_A Putative agmatinase; pr  42.7      12 0.00051   17.4   2.4   27    5-31     81-107 (287)
 14 1dih_A Dihydrodipicolinate red  42.3      13 0.00055   17.2   2.5   24    3-26     86-109 (273)
 15 2cev_A Protein (arginase); enz  42.0      10 0.00043   17.9   1.9   27    6-32     83-109 (299)
 16 3bqs_A Uncharacterized protein  40.5      19  0.0008   16.1   4.3   53   30-86      4-63  (93)
 17 3ijp_A DHPR, dihydrodipicolina  40.4      11 0.00045   17.8   1.8   24    4-27    103-126 (288)
 18 2aeb_A Arginase 1; hydrolase,   39.9      12 0.00049   17.5   1.9   26    7-32     86-111 (322)
 19 1p9l_A Dihydrodipicolinate red  37.6      18 0.00076   16.3   2.6   24    2-25     58-81  (245)
 20 1pq3_A Arginase II, mitochondr  37.1      14 0.00057   17.1   1.9   26    7-32     82-107 (306)
 21 3llm_A ATP-dependent RNA helic  36.8      18 0.00076   16.3   2.5   25  114-138   111-135 (235)
 22 1gq6_A Proclavaminate amidino   36.6      12 0.00051   17.4   1.6   26    5-30    104-129 (313)
 23 1db3_A GDP-mannose 4,6-dehydra  36.4      11 0.00048   17.6   1.4   18   12-29      1-18  (372)
 24 1vm6_A DHPR, dihydrodipicolina  36.1      14 0.00057   17.1   1.8   26    3-28     67-92  (228)
 25 3mmr_A Arginase; malaria, ABH,  34.6      14 0.00057   17.1   1.6   25    7-31    180-204 (413)
 26 1woh_A Agmatinase; alpha/beta   34.4      21  0.0009   15.8   2.6   29    6-34    105-133 (305)
 27 1lvg_A Guanylate kinase, GMP k  34.4      16 0.00069   16.6   1.9   75  111-194   117-191 (198)
 28 1n7h_A GDP-D-mannose-4,6-dehyd  34.0      14 0.00059   17.0   1.6   35  173-207   336-370 (381)
 29 1t2a_A GDP-mannose 4,6 dehydra  34.0      13 0.00055   17.2   1.4   21    9-29     19-41  (375)
 30 1knq_A Gluconate kinase; ALFA/  33.8      24   0.001   15.4   4.1   67  111-188   104-171 (175)
 31 2ef5_A Arginase; TTHA1496, str  33.6      10 0.00044   17.8   0.8   26    6-31     80-105 (290)
 32 2pt5_A Shikimate kinase, SK; a  33.1     6.2 0.00026   19.3  -0.4   67  112-187    94-160 (168)
 33 1u83_A Phosphosulfolactate syn  32.7      25  0.0011   15.3   3.0   77    2-98     82-158 (276)
 34 2bka_A CC3, TAT-interacting pr  32.7      25  0.0011   15.3   3.0   27    4-30      9-36  (242)
 35 1y1p_A ARII, aldehyde reductas  30.8      17 0.00073   16.4   1.6   20   10-29      9-28  (342)
 36 1xrs_B D-lysine 5,6-aminomutas  29.1      22 0.00094   15.7   1.9   21  114-134   162-183 (262)
 37 2z1m_A GDP-D-mannose dehydrata  29.0      19 0.00081   16.1   1.6   18   11-28      2-19  (345)
 38 3i6i_A Putative leucoanthocyan  28.8      18 0.00077   16.2   1.4   20   10-30      9-28  (346)
 39 1e6u_A GDP-fucose synthetase;   27.9      11 0.00048   17.6   0.3   18   11-29      3-20  (321)
 40 1pgy_A SWA2P; UBA, ubiquitin,   27.4      22 0.00092   15.7   1.6   40  140-186     2-43  (47)
 41 2x6t_A AGME,, ADP-L-glycero-D-  26.9      20 0.00086   15.9   1.4   18   11-28     45-62  (357)
 42 2waq_Q DNA-directed RNA polyme  26.6      17 0.00072   16.4   1.0   26  170-195    54-79  (104)
 43 1rkx_A CDP-glucose-4,6-dehydra  26.5      26  0.0011   15.2   1.9   21    9-29      6-26  (357)
 44 2gn4_A FLAA1 protein, UDP-GLCN  26.1      24 0.00099   15.5   1.6   20   11-30     20-39  (344)
 45 2rh8_A Anthocyanidin reductase  25.4      24   0.001   15.4   1.6   20   11-30      8-27  (338)
 46 1qyd_A Pinoresinol-lariciresin  25.4      20 0.00083   16.0   1.1   18   11-29      4-21  (313)
 47 1qyc_A Phenylcoumaran benzylic  25.4      20 0.00083   16.0   1.1   19   11-30      4-22  (308)
 48 2c29_D Dihydroflavonol 4-reduc  25.0      18 0.00074   16.4   0.8   20   10-29      3-22  (337)
 49 2qt1_A Nicotinamide riboside k  24.0      32  0.0013   14.6   1.9   71  113-187   132-202 (207)
 50 2i2x_B MTAC, methyltransferase  22.6      38  0.0016   14.2   2.3   14  115-128   157-170 (258)
 51 2r6j_A Eugenol synthase 1; phe  22.5      26  0.0011   15.2   1.3   19   11-30     11-29  (318)
 52 2yy7_A L-threonine dehydrogena  22.4      29  0.0012   14.9   1.5   17   12-29      3-19  (312)
 53 1sb8_A WBPP; epimerase, 4-epim  22.4      28  0.0012   15.0   1.4   19   11-29     26-44  (352)
 54 2gas_A Isoflavone reductase; N  22.2      27  0.0011   15.1   1.3   19   11-30      2-20  (307)
 55 3hkz_Y DNA-directed RNA polyme  22.1      17 0.00073   16.4   0.3   27  169-195    53-79  (104)
 56 1qwg_A PSL synthase;, (2R)-pho  21.5      40  0.0017   14.0   6.1   29    2-31     57-85  (251)
 57 2jb0_B Colicin E7; hydrolase/i  20.4      42  0.0018   13.9   2.0   47   37-85     30-80  (131)
 58 1z45_A GAL10 bifunctional prot  20.1      36  0.0015   14.3   1.6   24    6-29      5-28  (699)

No 1  
>3foz_A TRNA delta(2)-isopentenylpyrophosphate transferase; nucleoside modification, isopentenyl-tRNA transferase, MIAA, transferase/RNA complex; 2.50A {Escherichia coli k-12} PDB: 2zxu_A* 2zm5_A
Probab=100.00  E-value=0  Score=447.18  Aligned_cols=214  Identities=35%  Similarity=0.597  Sum_probs=197.4

Q ss_pred             HHHHH-HHHHCCCCEEEECCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHH
Q ss_conf             46899-99963994089789327999996172448899989999999999962235556655311623202357015699
Q 537021.9.peg.8    2 LSKKL-QRYKKRFLPIIVGGTGLYFRALTGQLSIMPEIPTAIREKIREKLKQYGSHILHDELSSLDSIVARQIHPSDGQR   80 (217)
Q Consensus         2 ~~k~~-e~~~r~kiPIiVGGTglY~~all~g~~~~p~~~~~ir~~~~~~~~~~g~~~l~~~L~~~DP~~a~~i~~nd~~R   80 (217)
                      +.+.+ +++++|++||||||||||++||++|+++.|++|+.+|.++++.....|.+.+|++|+++||++|++||+||++|
T Consensus        88 a~~~i~~i~~~~k~pIlVGGTglYl~all~g~~~~p~~~~~~r~~~~~~~~~~g~~~l~~~L~~iDp~~a~~i~~nd~~R  167 (316)
T 3foz_A           88 ALAEMADITAAGRIPLLVGGTMLYFKALLEGLSPLPSADPEVRARIEQQAAEQGWESLHRQLQEVDPVAAARIHPNDPQR  167 (316)
T ss_dssp             HHHHHHHHHHTTCEEEEEESCHHHHHHHHSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHSCTTCHHH
T ss_pred             HHHHHHHHHHCCCCCEEECCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHCCCCCHHH
T ss_conf             99899999965997089735178999998298779999979988765431016999999999973999996159666889


Q ss_pred             HHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCHHHHH
Q ss_conf             99999998534887467754154567770010000107867899999997776542113456777751138-63101344
Q 537021.9.peg.8   81 IARALEIKLVSGQSIIEFWKQAPNPFIPLESAHKIIILPERSALKERIRRRFTQMLESGAIDEIRSLMKMN-LSLDLPIM  159 (217)
Q Consensus        81 i~RaLEi~~~tGk~~s~~~~~~~~~~~~~~~~~~i~l~~~r~~L~~rI~~R~~~Ml~~GlieEv~~L~~~~-~~~~~~~~  159 (217)
                      |+|||||+..||+++|+|+...+.+ .++..+.++++.+||+.||+||+.||+.|+++||++||+.|++++ ++.+++++
T Consensus       168 i~RAlEv~~~tGk~~s~~~~~~~~~-~~~~~~~i~~~~~~re~L~~rI~~Rv~~Ml~~GlieEv~~L~~~~~~~~~~~~~  246 (316)
T 3foz_A          168 LSRALEVFFISGKTLTELTQTSGDA-LPYQVHQFAIAPASRELLHQRIEQRFHQMLASGFEAEVRALFARGDLHTDLPSI  246 (316)
T ss_dssp             HHHHHHHHHHHSSCHHHHHTSCCCC-CSSEEEEEEEECSSHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHSCCCTTSTTT
T ss_pred             HHHHHHHHHHHCCCHHHHHHCCCCC-CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHH
T ss_conf             9999999996179878886313788-887633899618999999999999999998740899999999843677431555


Q ss_pred             HCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCC
Q ss_conf             206856778986789998999999999999888887688628887531169830104
Q 537021.9.peg.8  160 KAIGVRDIIALLKGEINYDETLQRGIIATNKYAKRQKTWLCHQFQADWIRISSIDDL  216 (217)
Q Consensus       160 ~~IGYke~~~yL~g~~~~~e~~e~~~~~Tr~yAKRQ~TWfr~~~~~~w~~~~~~d~i  216 (217)
                      +||||||+.+||+|+++++++++.++++||||||||+||||++++++|++.++++++
T Consensus       247 ~aIGYkE~~~yL~g~~s~~eaie~i~~~TrqyAKRQ~TWfR~~~~i~wid~~~~~~~  303 (316)
T 3foz_A          247 RCVGYRQMWSYLEGEISYDEMVYRGVCATRQLAKRQITWLRGWEGVHWLDSEKPEQA  303 (316)
T ss_dssp             TSTTHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHSCSSCEEEETTCHHHH
T ss_pred             HEECHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHH
T ss_conf             413699999998599999999999999999999998898389998758789886899


No 2  
>3exa_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacillus halodurans} PDB: 2qgn_A
Probab=100.00  E-value=0  Score=440.34  Aligned_cols=211  Identities=30%  Similarity=0.515  Sum_probs=194.2

Q ss_pred             HHHHH-HHHHCCCCEEEECCCCHHHHHHHCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHH
Q ss_conf             46899-99963994089789327999996172448-89998999999999996223555665531162320235701569
Q 537021.9.peg.8    2 LSKKL-QRYKKRFLPIIVGGTGLYFRALTGQLSIM-PEIPTAIREKIREKLKQYGSHILHDELSSLDSIVARQIHPSDGQ   79 (217)
Q Consensus         2 ~~k~~-e~~~r~kiPIiVGGTglY~~all~g~~~~-p~~~~~ir~~~~~~~~~~g~~~l~~~L~~~DP~~a~~i~~nd~~   79 (217)
                      +.+.| ++++||++||||||||||++||++|+++. |+.++.++.+++...+..|.+.+|++|+++||++|++||+||++
T Consensus        81 a~~~i~~i~~r~k~PIlVGGTglYl~aLl~g~~~~~~~~~~~~r~~l~~~~~~~g~~~l~~~L~~~Dp~~a~~i~~nd~~  160 (322)
T 3exa_A           81 ATPLITEIHERGRLPFLVGGTGLYVNAVIHQFNLGDIRADEDYRHELEAFVNSYGVQALHDKLSKIDPKAAAAIHPNNYR  160 (322)
T ss_dssp             HHHHHHHHHHTTCEEEEESCCHHHHHHHHHTCCCCCCBCCHHHHHHHHHHHHHSCHHHHHHHHHTTCHHHHTTSCTTCHH
T ss_pred             HHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHCCCCCHH
T ss_conf             99999999976998099948388999998185455445998999999999997283999999987594988633866207


Q ss_pred             HHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
Q ss_conf             99999999853488746775415456777001000010786789999999777654211345677775113863101344
Q 537021.9.peg.8   80 RIARALEIKLVSGQSIIEFWKQAPNPFIPLESAHKIIILPERSALKERIRRRFTQMLESGAIDEIRSLMKMNLSLDLPIM  159 (217)
Q Consensus        80 Ri~RaLEi~~~tGk~~s~~~~~~~~~~~~~~~~~~i~l~~~r~~L~~rI~~R~~~Ml~~GlieEv~~L~~~~~~~~~~~~  159 (217)
                      ||+|||||+..||+++|+++.+.+.. ...+++++|+|.+||+.||+||++||+.||++||++||+.|+++++ .+.+++
T Consensus       161 Ri~RAlEv~~~tg~~~s~~~~~~~~~-~~~~~~~~i~L~~~r~~L~~rI~~Rv~~Ml~~GlieEv~~L~~~~~-~~~~~~  238 (322)
T 3exa_A          161 RVIRALEIIKLTGKTVTEQARHEEET-PSPYNLVMIGLTMERDVLYDRINRRVDQMVEEGLIDEAKKLYDRGI-RDCQSV  238 (322)
T ss_dssp             HHHHHHHHHHHTC---------------CCSEEEEEEEECCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTC-CSSTGG
T ss_pred             HHHHHHHHHHHCCCCHHHHHHCCCCC-CCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC-CCCCHH
T ss_conf             89999999997068888986325578-8876438999716558789999999999997786899999986255-545400


Q ss_pred             HCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH
Q ss_conf             2068567789867899989999999999998888876886288875311698301
Q 537021.9.peg.8  160 KAIGVRDIIALLKGEINYDETLQRGIIATNKYAKRQKTWLCHQFQADWIRISSID  214 (217)
Q Consensus       160 ~~IGYke~~~yL~g~~~~~e~~e~~~~~Tr~yAKRQ~TWfr~~~~~~w~~~~~~d  214 (217)
                      +||||||+.+||+|++++++|++.++++||||||||+||||++++++|++.++.+
T Consensus       239 ~aIGYkE~~~yL~g~~s~ee~ie~i~~~Tr~yAKRQ~TWfR~~~~i~w~d~~~~~  293 (322)
T 3exa_A          239 QAIGYKEMYDYLDGNVTLEEAIDTLKRNSRRYAKRQLTWFRNKANVTWFDMTDVD  293 (322)
T ss_dssp             GSTTTHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEEEECTTCC
T ss_pred             CEEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCC
T ss_conf             0022999999986999999999999999999999999981899998265698738


No 3  
>3crm_A TRNA delta(2)-isopentenylpyrophosphate transferase; ATP-binding, nucleotide-binding, nucleotidyltransferase, tRNA processing; 1.90A {Pseudomonas aeruginosa} PDB: 3crq_A 3crr_A
Probab=100.00  E-value=0  Score=447.36  Aligned_cols=214  Identities=34%  Similarity=0.553  Sum_probs=195.5

Q ss_pred             HHHHH-HHHHCCCCEEEECCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHH
Q ss_conf             46899-99963994089789327999996172448899989999999999962235556655311623202357015699
Q 537021.9.peg.8    2 LSKKL-QRYKKRFLPIIVGGTGLYFRALTGQLSIMPEIPTAIREKIREKLKQYGSHILHDELSSLDSIVARQIHPSDGQR   80 (217)
Q Consensus         2 ~~k~~-e~~~r~kiPIiVGGTglY~~all~g~~~~p~~~~~ir~~~~~~~~~~g~~~l~~~L~~~DP~~a~~i~~nd~~R   80 (217)
                      +.+.+ +++++|++||||||||||++||++|+++.|++++++|++++......|.+.+|++|+++||++|++||+||++|
T Consensus        83 a~~~i~~i~~~gk~PIiVGGTglYl~aLl~g~~~~p~~~~~~r~~~~~~~~~~g~~~l~~~L~~iDp~~a~~i~~nd~~R  162 (323)
T 3crm_A           83 ALAAMAKATARGRIPLLVGGTMLYYKALLEGLADMPGADPEVRAAIEAEAQAEGWEALHRQLAEVDPESAARIHPNDPQR  162 (323)
T ss_dssp             HHHHHHHHHHTTCEEEEEESCHHHHHHHHCCC------------------------------------------------
T ss_pred             HHHHHHHHHHCCCCEEEECCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHCCCCCHHH
T ss_conf             99999999835994089756139999998399778852166899999986523799999999875909885079665779


Q ss_pred             HHHHHHHHHHCCCCHHHHHHHCCCCCC---------CCHHHEEEEECC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             999999985348874677541545677---------700100001078-6789999999777654211345677775113
Q 537021.9.peg.8   81 IARALEIKLVSGQSIIEFWKQAPNPFI---------PLESAHKIIILP-ERSALKERIRRRFTQMLESGAIDEIRSLMKM  150 (217)
Q Consensus        81 i~RaLEi~~~tGk~~s~~~~~~~~~~~---------~~~~~~~i~l~~-~r~~L~~rI~~R~~~Ml~~GlieEv~~L~~~  150 (217)
                      |+|||||+..||+++|+|+.+++.+..         ..+++++|++.+ ||+.||+||+.||+.||++||++||+.|+++
T Consensus       163 i~RAlEv~~~tGk~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~R~~L~~rI~~Rvd~Ml~~GlieEv~~l~~~  242 (323)
T 3crm_A          163 LMRALEVYRLGGVSMSDLRRRQSAEKADFDASGRNQLPYTVAQLAIAPEQRQVLHARIAQRFRQMLEQGFIAEVEALHAR  242 (323)
T ss_dssp             -------------------------------------CSEEEEEEEECSSHHHHHHHHHHHHHHHHHTTHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHC
T ss_conf             99999999985987799886434554554433345788755899983778999999999999999985769999999862


Q ss_pred             C-CCCHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHC
Q ss_conf             8-6310134420685677898678999899999999999988888768862888753116983010
Q 537021.9.peg.8  151 N-LSLDLPIMKAIGVRDIIALLKGEINYDETLQRGIIATNKYAKRQKTWLCHQFQADWIRISSIDD  215 (217)
Q Consensus       151 ~-~~~~~~~~~~IGYke~~~yL~g~~~~~e~~e~~~~~Tr~yAKRQ~TWfr~~~~~~w~~~~~~d~  215 (217)
                      + ++.++++++||||||+.+||+|++++++|++.++++||||||||+||||++.+++|++.++.|+
T Consensus       243 ~~~~~~~~~~~aIGYkE~~~yL~g~~s~~e~~e~i~~~TrqyAKRQ~TWfR~~~~i~w~d~~~~~~  308 (323)
T 3crm_A          243 SDLHAGLPSIRAVGYRQVWDYLDGKLSYAEMTERGIIATRQLAKRQFTWLRSWSHLHWMDSLAGDN  308 (323)
T ss_dssp             TTCCTTSSGGGSTTHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHTCSSCEEEETTCSCH
T ss_pred             CCCCCCCCHHHEECHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCHHH
T ss_conf             368878835533349999999859999999999999999999989999848999881347988157


No 4  
>3d3q_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2; 2.70A {Staphylococcus epidermidis atcc 12228}
Probab=100.00  E-value=0  Score=431.62  Aligned_cols=209  Identities=27%  Similarity=0.418  Sum_probs=186.2

Q ss_pred             HHHHH-HHHHCCCCEEEECCCCHHHHHHHCCCCCCCCCCHHHHHHHHHH----HHHHHHHHHHHHHHHCCHHHHCCCCCH
Q ss_conf             46899-9996399408978932799999617244889998999999999----996223555665531162320235701
Q 537021.9.peg.8    2 LSKKL-QRYKKRFLPIIVGGTGLYFRALTGQLSIMPEIPTAIREKIREK----LKQYGSHILHDELSSLDSIVARQIHPS   76 (217)
Q Consensus         2 ~~k~~-e~~~r~kiPIiVGGTglY~~all~g~~~~p~~~~~ir~~~~~~----~~~~g~~~l~~~L~~~DP~~a~~i~~n   76 (217)
                      +.+.| +++++|++||||||||||++||++|+++.|..++..+......    .+..|++.||++|+++||++|++||+|
T Consensus        85 a~~~i~~i~~~~kiPIlVGGTglYi~all~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~L~~~L~~~Dp~~a~~i~~n  164 (340)
T 3d3q_A           85 AEKYIKDITRRGKVPIIAGGTGLYIQSLLYNYAFEDESISEDKMKQVKLKLKELEHLNNNKLHEYLASFDKESAKDIHPN  164 (340)
T ss_dssp             HHHHHHHHHHTTCEEEEECCCHHHHHHHHBCSCCC---CCHHHHHHHHHHHHTTSSSCHHHHHHHHHHHCHHHHHHSCTT
T ss_pred             HHHHHHHHHHCCCCEEEECCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             99999999975997199817088999998487755678857788999998888987369999999983259999736966


Q ss_pred             HHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
Q ss_conf             56999999999853488746775415456777001000010786789999999777654211345677775113863101
Q 537021.9.peg.8   77 DGQRIARALEIKLVSGQSIIEFWKQAPNPFIPLESAHKIIILPERSALKERIRRRFTQMLESGAIDEIRSLMKMNLSLDL  156 (217)
Q Consensus        77 d~~Ri~RaLEi~~~tGk~~s~~~~~~~~~~~~~~~~~~i~l~~~r~~L~~rI~~R~~~Ml~~GlieEv~~L~~~~~~~~~  156 (217)
                      |++||+|||||+..||+++|++......  ...+++++|+|.+||+.||+||+.||+.|+++||++||+.|+++|+ .+.
T Consensus       165 d~rRi~RalEi~~~tgk~~s~~~~~~~~--~~~~~~~~i~L~~~r~~L~~rI~~Rvd~Ml~~GlleEv~~L~~~~~-~~~  241 (340)
T 3d3q_A          165 NRKRVLRAIEYYLKTKKLLSSRKKVQQF--TENYDTLLIGIEMSRETLYLRINKRVDIMLGHGLFNEVQHLVEQGF-EAS  241 (340)
T ss_dssp             CHHHHHHHHHHHHHHCSCSHHHHHHHHH--SBCSEEEEEEEECCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTC-TTS
T ss_pred             CCCHHHHHHHHHHHHCCCHHHHHCCCCC--CCCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCC-CCC
T ss_conf             6306789999999828842444213677--7886644011476799999999999999998788999999997489-966


Q ss_pred             HHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH
Q ss_conf             344206856778986789998999999999999888887688628887531169830
Q 537021.9.peg.8  157 PIMKAIGVRDIIALLKGEINYDETLQRGIIATNKYAKRQKTWLCHQFQADWIRISSI  213 (217)
Q Consensus       157 ~~~~~IGYke~~~yL~g~~~~~e~~e~~~~~Tr~yAKRQ~TWfr~~~~~~w~~~~~~  213 (217)
                      ++++||||||+.+||+|++++++|++.++++||||||||+||||++++++|+++++.
T Consensus       242 ~~~kaIGYkE~~~yL~g~islee~ie~i~~~TrqyAKRQ~TWfR~~~~i~w~d~~~~  298 (340)
T 3d3q_A          242 QSMQAIGYKELVPVIKGNISMENAVEKLKQHSRQYAKRQLTWFKNKMNVHWLNKERM  298 (340)
T ss_dssp             SGGGSTTTTTHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEETTTC
T ss_pred             CCCEEEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCC
T ss_conf             000346099999998699999999999999999999999998089999916688856


No 5  
>3eph_A TRNA isopentenyltransferase; transferase, alternative initiation, ATP-binding, cytoplasm, mitochondrion, nucleotide-binding, nucleus; 2.95A {Saccharomyces cerevisiae} PDB: 3epj_A 3epk_A* 3epl_A*
Probab=100.00  E-value=0  Score=403.21  Aligned_cols=211  Identities=22%  Similarity=0.372  Sum_probs=189.6

Q ss_pred             HHHHH-HHHHCCCCEEEECCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHH
Q ss_conf             46899-99963994089789327999996172448899989999999999962235556655311623202357015699
Q 537021.9.peg.8    2 LSKKL-QRYKKRFLPIIVGGTGLYFRALTGQLSIMPEIPTAIREKIREKLKQYGSHILHDELSSLDSIVARQIHPSDGQR   80 (217)
Q Consensus         2 ~~k~~-e~~~r~kiPIiVGGTglY~~all~g~~~~p~~~~~ir~~~~~~~~~~g~~~l~~~L~~~DP~~a~~i~~nd~~R   80 (217)
                      +.+.| ++++||++||||||||||++||++|+++.|..++.++.+....++..|.+.+|++|+++||++|+++||||++|
T Consensus        80 a~~~i~~i~~rgk~PIiVGGT~~Yi~aLl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~vDP~~A~kihpnd~rR  159 (409)
T 3eph_A           80 CMNAIEDIHRRGKIPIVVGGTHYYLQTLFNKRVDTKSSERKLTRKQLDILESTDPDVIYNTLVKCDPDIATKYHPNDYRR  159 (409)
T ss_dssp             HHHHHHHHHTTTCEEEEECSCGGGGGGGGTCSCCCSSSCCCCCHHHHHHHTCSSSSSHHHHHHHSCHHHHTTSCTTCHHH
T ss_pred             HHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHCCCCHHHH
T ss_conf             99999999862896599888217999997430457410288999999998740499999998602788776349737789


Q ss_pred             HHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-------
Q ss_conf             9999999853488746775415456777001000010786789999999777654211345677775113863-------
Q 537021.9.peg.8   81 IARALEIKLVSGQSIIEFWKQAPNPFIPLESAHKIIILPERSALKERIRRRFTQMLESGAIDEIRSLMKMNLS-------  153 (217)
Q Consensus        81 i~RaLEi~~~tGk~~s~~~~~~~~~~~~~~~~~~i~l~~~r~~L~~rI~~R~~~Ml~~GlieEv~~L~~~~~~-------  153 (217)
                      |+||||||+.||+++|+++..++..  ..+++++|++.++++.|++||+.||+.|+++||++||+.|++.+..       
T Consensus       160 I~RaLei~~~tG~~~S~~~~~~~~~--~~~~~~~~~l~~~~~~L~~rI~~Rvd~Ml~~Gll~Ev~~l~~~~~~~~~~~~~  237 (409)
T 3eph_A          160 VQRMLEIYYKTGKKPSETFNEQKIT--LKFDTLFLWLYSKPEPLFQRLDDRVDDMLERGALQEIKQLYEYYSQNKFTPEQ  237 (409)
T ss_dssp             HHHHHHHHHHHCSCHHHHHHTCCCC--CSSEEEEEEEECCHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHTTTTCCGGG
T ss_pred             HHHHHHHHHHCCCCHHHHHHHCCCC--CCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCC
T ss_conf             9999999981268889996420456--54112110247977889989999999999867699999999733645567210


Q ss_pred             CHHHHHHCCCHHHHHHHHCCC-----CCHHHHHHHHHHHHHHHHHHHHHHHCCCC------CCCCCCCCCHH
Q ss_conf             101344206856778986789-----99899999999999988888768862888------75311698301
Q 537021.9.peg.8  154 LDLPIMKAIGVRDIIALLKGE-----INYDETLQRGIIATNKYAKRQKTWLCHQF------QADWIRISSID  214 (217)
Q Consensus       154 ~~~~~~~~IGYke~~~yL~g~-----~~~~e~~e~~~~~Tr~yAKRQ~TWfr~~~------~~~w~~~~~~d  214 (217)
                      .+.++++||||||+.+||+|+     +++++|++.++.+||||||||+||||+++      +++|+|.++.+
T Consensus       238 ~~~gi~qaIGykE~~~yL~g~~~~~~~~lee~ie~ik~~TrqYAKrQ~tW~r~~~~~~~~~~~~~lD~td~~  309 (409)
T 3eph_A          238 CENGVWQVIGFKEFLPWLTGKTDDNTVKLEDCIERMKTRTRQYAKRQVKWIKKMLIPDIKGDIYLLDATDLS  309 (409)
T ss_dssp             TTSGGGGSTTTGGGGGGGC-------CCHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHTTTCEEEEECSCTT
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCHHH
T ss_conf             134788884399999997487765635899999999999999999999997036652258874220651477


No 6  
>3a8t_A Adenylate isopentenyltransferase; rossmann fold protein; HET: ATP; 2.37A {Humulus lupulus}
Probab=100.00  E-value=2.8e-42  Score=296.51  Aligned_cols=156  Identities=21%  Similarity=0.229  Sum_probs=125.3

Q ss_pred             HHHHH-HHHHCCCCEEEECCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHH
Q ss_conf             46899-99963994089789327999996172448899989999999999962235556655311623202357015699
Q 537021.9.peg.8    2 LSKKL-QRYKKRFLPIIVGGTGLYFRALTGQLSIMPEIPTAIREKIREKLKQYGSHILHDELSSLDSIVARQIHPSDGQR   80 (217)
Q Consensus         2 ~~k~~-e~~~r~kiPIiVGGTglY~~all~g~~~~p~~~~~ir~~~~~~~~~~g~~~l~~~L~~~DP~~a~~i~~nd~~R   80 (217)
                      +.+.| ++++||++||||||||||++||++|.  +|+.+|+++++..                           .+..+ 
T Consensus       119 A~~~I~~i~~rgkiPIlVGGTglYl~ALL~g~--l~~~dP~i~~e~~---------------------------~~~~~-  168 (339)
T 3a8t_A          119 AGKAVSEITGRRKLPVLVGGSNSFIHALLVDR--FDSSGPGVFEEGS---------------------------HSVVS-  168 (339)
T ss_dssp             HHHHHHHHHHTTCEEEEECCCHHHHHHHHBSS--CCTTCC----------------------------------------
T ss_pred             HHHHHHHHHHCCCCEEEECCCHHHHHHHHCCC--CCCCCHHHHHHHC---------------------------HHHHH-
T ss_conf             99999999848996499757207889886387--7788989999855---------------------------14344-


Q ss_pred             HHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-------CC
Q ss_conf             99999998534887467754154567770010000107867899999997776542113456777751138-------63
Q 537021.9.peg.8   81 IARALEIKLVSGQSIIEFWKQAPNPFIPLESAHKIIILPERSALKERIRRRFTQMLESGAIDEIRSLMKMN-------LS  153 (217)
Q Consensus        81 i~RaLEi~~~tGk~~s~~~~~~~~~~~~~~~~~~i~l~~~r~~L~~rI~~R~~~Ml~~GlieEv~~L~~~~-------~~  153 (217)
                                           .    ...+++++|+|++||+.|++||++||+.|+++||++||+.|++.+       ..
T Consensus       169 ---------------------~----~lr~~~~~i~L~~~r~~L~~RI~~Rvd~Ml~~GlleEv~~L~~~~~~~~~~~~~  223 (339)
T 3a8t_A          169 ---------------------S----ELRYDCCFLWVDVSVKVLTDYLAKRVDDMLELGMFDELAEFYSPEDEDHDEDSA  223 (339)
T ss_dssp             --------------------------CBSSEEEEEEEECCHHHHHHHHHHHHHHHHHHTHHHHHHHHCCTTCSCTTSCGG
T ss_pred             ---------------------H----HHCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCC
T ss_conf             ---------------------4----421563589951999999999999999999772999999998620201234555


Q ss_pred             CHHHHHHCCCHHHHHHHHCC-----------------CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC----CCCCC
Q ss_conf             10134420685677898678-----------------9998999999999999888887688628887531----16983
Q 537021.9.peg.8  154 LDLPIMKAIGVRDIIALLKG-----------------EINYDETLQRGIIATNKYAKRQKTWLCHQFQADW----IRISS  212 (217)
Q Consensus       154 ~~~~~~~~IGYke~~~yL~g-----------------~~~~~e~~e~~~~~Tr~yAKRQ~TWfr~~~~~~w----~~~~~  212 (217)
                      .+.++++||||||+.+||+|                 +.+++++++.++++||||||||+||||+...+.|    +|.++
T Consensus       224 ~~~~~~qaIGYkE~~~yL~g~~~~~~~~~~~~~~~~~~~sleeaie~ik~~TrqYAKRQ~TWfRr~~~~~W~~~~~Da~~  303 (339)
T 3a8t_A          224 TRTGLRKAIGVPEFDRYFEKFRPGDVEGEDPGRDRVRRGAFEEAVRAIKENTCHLAKRQIGKILRLKGAGWDLRRLDATE  303 (339)
T ss_dssp             GSCGGGGSTTHHHHHHHHHHSCTTCCCCSCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCEEEEECHH
T ss_pred             CCCCCHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCC
T ss_conf             45672012378999999836453211111001234567669999999999999999999999676876898655651652


No 7  
>2ze6_A Isopentenyl transferase; crown GALL tumor, cytokinin biosynthesis, plasmid; HET: DST AMP; 2.10A {Agrobacterium tumefaciens} PDB: 2ze5_A* 2ze7_A* 2ze8_A
Probab=99.37  E-value=1.2e-13  Score=108.98  Aligned_cols=143  Identities=14%  Similarity=0.072  Sum_probs=91.3

Q ss_pred             HHHHHHCCCCEEEECCCCHHHHHHHCCCCCCCCCCHHHH-----------HH----HHHHHH-HHHHHHHHHHHHHCCHH
Q ss_conf             999996399408978932799999617244889998999-----------99----999999-62235556655311623
Q 537021.9.peg.8    5 KLQRYKKRFLPIIVGGTGLYFRALTGQLSIMPEIPTAIR-----------EK----IREKLK-QYGSHILHDELSSLDSI   68 (217)
Q Consensus         5 ~~e~~~r~kiPIiVGGTglY~~all~g~~~~p~~~~~ir-----------~~----~~~~~~-~~g~~~l~~~L~~~DP~   68 (217)
                      ..+++++|++||+|||||||++||++|....|.++..++           .+    +...+. ..+...+..++..+++.
T Consensus        83 i~~~~~~~~~pIlvGGTglY~~al~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~r~~~~l~~~~~~~~~~~el~~~~~~  162 (253)
T 2ze6_A           83 EVDWRKSEEGLILEGGSISLLNCMAKSPFWRSGFQWHVKRLRLGDSDAFLTRAKQRVAEMFAIREDRPSLLEELAELWNY  162 (253)
T ss_dssp             HHHTTTTSSEEEEEECCHHHHHHHHHCTTTTSSCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCSSSCCHHHHHHHHHTS
T ss_pred             HHHHHHCCCCEEEECCHHHHHHHHHCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC
T ss_conf             99999669988998885999999984996676667888760247667789999999998645450067899999997178


Q ss_pred             HHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHEEEEECCCHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Q ss_conf             202357015699999999985348874677541545677700100001078678999999977-7654211345677775
Q 537021.9.peg.8   69 VARQIHPSDGQRIARALEIKLVSGQSIIEFWKQAPNPFIPLESAHKIIILPERSALKERIRRR-FTQMLESGAIDEIRSL  147 (217)
Q Consensus        69 ~a~~i~~nd~~Ri~RaLEi~~~tGk~~s~~~~~~~~~~~~~~~~~~i~l~~~r~~L~~rI~~R-~~~Ml~~GlieEv~~L  147 (217)
                      .......++..+..++++.+..++.++..+.....    .... ..+--..++...+.++..| ++.|+++|.++||-..
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-~li~~i~~~~~~~~~~qer~f~~m~e~Ga~~~V~~~  237 (253)
T 2ze6_A          163 PAARPILEDIDGYRCAIRFARKHDLAISQLPNIDA----GRHV-ELIEAIANEYLEHALSQERDFPQWPEDGAGQPVCPV  237 (253)
T ss_dssp             TTHHHHHTTSTTHHHHHHHHHHHTCCGGGGGGCCT----THHH-HHHHHHHHHHHHHHHHHHHHSCCCCC----------
T ss_pred             HHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHCH----HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
T ss_conf             14212400121179999999980898788986266----7899-999999999999999987512678766770402699


Q ss_pred             HHCCC
Q ss_conf             11386
Q 537021.9.peg.8  148 MKMNL  152 (217)
Q Consensus       148 ~~~~~  152 (217)
                      ....+
T Consensus       238 ~~~~~  242 (253)
T 2ze6_A          238 TLTRI  242 (253)
T ss_dssp             -----
T ss_pred             HHHHH
T ss_conf             99998


No 8  
>2a0m_A Arginase superfamily protein; structural genomics, PSI, protein structure initiative, structural genomics of pathogenic protozoa consortium; 1.60A {Trypanosoma cruzi} SCOP: c.42.1.1
Probab=49.69  E-value=6.5  Score=19.15  Aligned_cols=25  Identities=12%  Similarity=0.184  Sum_probs=17.3

Q ss_pred             HHHHHHCCCCEEEECCCCHHHHHHH
Q ss_conf             9999963994089789327999996
Q 537021.9.peg.8    5 KLQRYKKRFLPIIVGGTGLYFRALT   29 (217)
Q Consensus         5 ~~e~~~r~kiPIiVGGTglY~~all   29 (217)
                      ..+++++|++||++||.+-=.-+++
T Consensus       105 v~~i~~~g~~Pi~lGGdHsis~~~~  129 (316)
T 2a0m_A          105 VFTVLARGAFPFVIGGGNDQSAPNG  129 (316)
T ss_dssp             HHHHHHTTCEEEEEESCGGGHHHHH
T ss_pred             HHHHHHCCCEEEEECCCCHHHHHHH
T ss_conf             9999978996899568836758988


No 9  
>3lu1_A WBGU; rossman fold, epimerase, lipopolysaccharide, glycan, NADH, U glcnac, isomerase; HET: NAD UD2; 2.50A {Plesiomonas shigelloides}
Probab=47.29  E-value=12  Score=17.45  Aligned_cols=27  Identities=19%  Similarity=-0.031  Sum_probs=19.6

Q ss_pred             HHHHHHHCCCCEEEECCCCHHHHHHHC
Q ss_conf             899999639940897893279999961
Q 537021.9.peg.8    4 KKLQRYKKRFLPIIVGGTGLYFRALTG   30 (217)
Q Consensus         4 k~~e~~~r~kiPIiVGGTglY~~all~   30 (217)
                      ...++.-++|.-+|+|||||==.+|+.
T Consensus        30 ~~~~~~~~~K~ILVTGgtGfIGs~lv~   56 (364)
T 3lu1_A           30 ITQQLIFSPKTWLITGVAGFIGSNLLE   56 (364)
T ss_dssp             HHHHHHHSCCEEEEETTTSHHHHHHHH
T ss_pred             HHHHHCCCCCEEEEECCCCHHHHHHHH
T ss_conf             999735589989996887589999999


No 10 
>1sxj_A Activator 1 95 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ ATPase, DNA polymerase; HET: ATG ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=44.61  E-value=11  Score=17.78  Aligned_cols=83  Identities=12%  Similarity=0.077  Sum_probs=36.3

Q ss_pred             HHHHHHHCCCCEEEECCCCHHHHH---H---HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCC---CC
Q ss_conf             899999639940897893279999---9---61724488999899999999999622355566553116232023---57
Q 537021.9.peg.8    4 KKLQRYKKRFLPIIVGGTGLYFRA---L---TGQLSIMPEIPTAIREKIREKLKQYGSHILHDELSSLDSIVARQ---IH   74 (217)
Q Consensus         4 k~~e~~~r~kiPIiVGGTglY~~a---l---l~g~~~~p~~~~~ir~~~~~~~~~~g~~~l~~~L~~~DP~~a~~---i~   74 (217)
                      ..++.....+.||++=.+-.+...   +   ..-+.+.|....++...+.......+.        ++|++....   ..
T Consensus       170 ~l~~~~~~~~~piI~i~n~~~~~~i~~l~~r~~~I~F~~p~~~~i~~~l~~I~~~E~i--------~i~~~~l~~I~~~s  241 (516)
T 1sxj_A          170 QLAQFCRKTSTPLILICNERNLPKMRPFDRVCLDIQFRRPDANSIKSRLMTIAIREKF--------KLDPNVIDRLIQTT  241 (516)
T ss_dssp             HHHHHHHHCSSCEEEEESCTTSSTTGGGTTTSEEEECCCCCHHHHHHHHHHHHHHHTC--------CCCTTHHHHHHHHT
T ss_pred             HHHHHHHCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCC--------CCCHHHHHHHHHHC
T ss_conf             9998630234316888448744342443451489844799999999999999997499--------99755899999983


Q ss_pred             CHHHHHHHHHHHHHHHCCCC
Q ss_conf             01569999999998534887
Q 537021.9.peg.8   75 PSDGQRIARALEIKLVSGQS   94 (217)
Q Consensus        75 ~nd~~Ri~RaLEi~~~tGk~   94 (217)
                      .+|.|+++..|+.+..+++.
T Consensus       242 ~GDIR~aIn~Lq~~~~~~k~  261 (516)
T 1sxj_A          242 RGDIRQVINLLSTISTTTKT  261 (516)
T ss_dssp             TTCHHHHHHHHTHHHHHSSC
T ss_pred             CCCHHHHHHHHHHHHHCCCC
T ss_conf             99899999999999965998


No 11 
>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}
Probab=44.19  E-value=6.1  Score=19.37  Aligned_cols=18  Identities=28%  Similarity=0.377  Sum_probs=13.0

Q ss_pred             CCCCEEEECCCCHHHHHHH
Q ss_conf             3994089789327999996
Q 537021.9.peg.8   11 KRFLPIIVGGTGLYFRALT   29 (217)
Q Consensus        11 r~kiPIiVGGTglY~~all   29 (217)
                      |||| +|+|||||==.+|+
T Consensus         1 k~rI-LVTG~tGfIG~~l~   18 (322)
T 2p4h_X            1 KGRV-CVTGGTGFLGSWII   18 (322)
T ss_dssp             CCEE-EEESTTSHHHHHHH
T ss_pred             CCEE-EEECCCCHHHHHHH
T ss_conf             9969-99899878999999


No 12 
>3kb2_A SPBC2 prophage-derived uncharacterized protein YORR; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: G3D; 2.20A {Bacillus subtilis} PDB: 2axp_A*
Probab=43.70  E-value=14  Score=16.97  Aligned_cols=67  Identities=24%  Similarity=0.319  Sum_probs=42.6

Q ss_pred             HEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHH
Q ss_conf             000010786789999999777654211345677775113863101344206856778986789998999999999
Q 537021.9.peg.8  112 AHKIIILPERSALKERIRRRFTQMLESGAIDEIRSLMKMNLSLDLPIMKAIGVRDIIALLKGEINYDETLQRGII  186 (217)
Q Consensus       112 ~~~i~l~~~r~~L~~rI~~R~~~Ml~~GlieEv~~L~~~~~~~~~~~~~~IGYke~~~yL~g~~~~~e~~e~~~~  186 (217)
                      .++|+|.++.+.+.+||..|-....+..-++++...+...+. +.+ ...+      ..=.+..|.+|..+.|..
T Consensus        96 dl~IyL~~~~e~~~~Ri~~R~~~~~~~~~~~~i~~~~~e~~~-~~~-~~~~------~idt~~~s~eev~~~Ii~  162 (173)
T 3kb2_A           96 AKVVYLHADPSVIKKRLRVRGDEYIEGKDIDSILELYREVMS-NAG-LHTY------SWDTGQWSSDEIAKDIIF  162 (173)
T ss_dssp             EEEEEEECCHHHHHHHHHHHSCSCCCHHHHHHHHHHHHHHHH-TCS-SCEE------EEETTTSCHHHHHHHHHH
T ss_pred             CEEEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHC-CCC-CCEE------EEECCCCCHHHHHHHHHH
T ss_conf             789995599999999998537642024657799999999860-366-6559------988999999999999999


No 13 
>3lhl_A Putative agmatinase; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.30A {Clostridium difficile}
Probab=42.71  E-value=12  Score=17.39  Aligned_cols=27  Identities=15%  Similarity=0.244  Sum_probs=18.8

Q ss_pred             HHHHHHCCCCEEEECCCCHHHHHHHCC
Q ss_conf             999996399408978932799999617
Q 537021.9.peg.8    5 KLQRYKKRFLPIIVGGTGLYFRALTGQ   31 (217)
Q Consensus         5 ~~e~~~r~kiPIiVGGTglY~~all~g   31 (217)
                      ..+++++|++||++||-+----+.+.+
T Consensus        81 v~~~l~~~~~pi~lGGdHsit~~~~~a  107 (287)
T 3lhl_A           81 TYKIVRDSKVPFMIGGEHLVTLPAFKA  107 (287)
T ss_dssp             HHHHHHTTCEEEEEESSGGGHHHHHHH
T ss_pred             HHHHHHCCCCEEEECCCCCCCHHHHHH
T ss_conf             999995798169978766452167899


No 14 
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=42.27  E-value=13  Score=17.19  Aligned_cols=24  Identities=17%  Similarity=0.187  Sum_probs=16.9

Q ss_pred             HHHHHHHHCCCCEEEECCCCHHHH
Q ss_conf             689999963994089789327999
Q 537021.9.peg.8    3 SKKLQRYKKRFLPIIVGGTGLYFR   26 (217)
Q Consensus         3 ~k~~e~~~r~kiPIiVGGTglY~~   26 (217)
                      .+.++...+.++|+|+|=||+=-+
T Consensus        86 ~~~~~~~~~~~~p~ViGTTG~~~~  109 (273)
T 1dih_A           86 LNHLAFCRQHGKGMVIGTTGFDEA  109 (273)
T ss_dssp             HHHHHHHHHTTCEEEECCCCCCHH
T ss_pred             HHHHHHHHHCCCCEEEECCCCCCH
T ss_conf             999999996287679954798601


No 15 
>2cev_A Protein (arginase); enzyme, hydrolase, arginine hydrolysis, nitrogen metabolism, manganese metalloenzyme; 2.15A {Bacillus caldovelox} SCOP: c.42.1.1 PDB: 1cev_A 3cev_A* 4cev_A 5cev_A*
Probab=41.99  E-value=10  Score=17.86  Aligned_cols=27  Identities=15%  Similarity=0.204  Sum_probs=19.8

Q ss_pred             HHHHHCCCCEEEECCCCHHHHHHHCCC
Q ss_conf             999963994089789327999996172
Q 537021.9.peg.8    6 LQRYKKRFLPIIVGGTGLYFRALTGQL   32 (217)
Q Consensus         6 ~e~~~r~kiPIiVGGTglY~~all~g~   32 (217)
                      .+++++|++||++||-+----+.+.++
T Consensus        83 ~~~~~~g~~pi~lGGdHsit~~~~~a~  109 (299)
T 2cev_A           83 DQVVQRGRFPLVLGGDHSIAIGTLAGV  109 (299)
T ss_dssp             HHHHHTTCEEEEEESSGGGHHHHHHHH
T ss_pred             HHHHHCCCEEEEECCCCCCCHHHHHHH
T ss_conf             999966985898368765225567899


No 16 
>3bqs_A Uncharacterized protein; 10114F, NYSGXRC, PSI-2, structural genomics, protein structure initiative; 1.42A {Listeria monocytogenes str} PDB: 3bqt_A 3mab_A
Probab=40.54  E-value=19  Score=16.14  Aligned_cols=53  Identities=23%  Similarity=0.251  Sum_probs=37.3

Q ss_pred             CCCCCCCCCCHHHHHHHH-------HHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHH
Q ss_conf             172448899989999999-------999962235556655311623202357015699999999
Q 537021.9.peg.8   30 GQLSIMPEIPTAIREKIR-------EKLKQYGSHILHDELSSLDSIVARQIHPSDGQRIARALE   86 (217)
Q Consensus        30 ~g~~~~p~~~~~ir~~~~-------~~~~~~g~~~l~~~L~~~DP~~a~~i~~nd~~Ri~RaLE   86 (217)
                      ..+..+|.+.+.+.+.+.       +.+...|...+|.+|++.++.    .+.+--+-+..|++
T Consensus         4 ~~L~~LPNig~~~e~~L~~iGI~~~~~L~~~ga~~~y~rLk~~~~~----~~~~~L~aL~gAl~   63 (93)
T 3bqs_A            4 ANLSELPNIGKVLEQDLIKAGIKTPVELKDVGSKEAFLRIWENDSS----VCMSELYALEGAVQ   63 (93)
T ss_dssp             SCGGGSTTCCHHHHHHHHHTTCCSHHHHHHHHHHHHHHHHHTTCTT----CCHHHHHHHHHHHH
T ss_pred             HHHHHCCCCCHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHCCC----CCHHHHHHHHHHHC
T ss_conf             7772489999999999999399989999867999999999986899----60999999999994


No 17 
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=40.37  E-value=11  Score=17.78  Aligned_cols=24  Identities=21%  Similarity=0.138  Sum_probs=16.4

Q ss_pred             HHHHHHHCCCCEEEECCCCHHHHH
Q ss_conf             899999639940897893279999
Q 537021.9.peg.8    4 KKLQRYKKRFLPIIVGGTGLYFRA   27 (217)
Q Consensus         4 k~~e~~~r~kiPIiVGGTglY~~a   27 (217)
                      ..++...+.++|+|+|-||+.-..
T Consensus       103 ~~~~~~~~~~~plViGTTG~~~~~  126 (288)
T 3ijp_A          103 LYANYAAQKSLIHIIGTTGFSKTE  126 (288)
T ss_dssp             HHHHHHHHHTCEEEECCCCCCHHH
T ss_pred             HHHHHHHHCCCCEEEEECCCCHHH
T ss_conf             899999873960798305544225


No 18 
>2aeb_A Arginase 1; hydrolase, binuclear manganese cluster, boronic acid inhibitor, perfectly twinned crystal; HET: AB5; 1.29A {Homo sapiens} SCOP: c.42.1.1 PDB: 1wva_A* 2pha_A 2pho_A 2pll_A* 2zav_A 3dj8_A* 3f80_A* 3gmz_A 3gn0_A* 3kv2_A* 3lp4_A* 3lp7_A* 3mfv_A* 3mfw_A* 3mjl_A 1wvb_A* 3e6v_A* 3e6k_A* 1d3v_A* 1hq5_A* ...
Probab=39.88  E-value=12  Score=17.52  Aligned_cols=26  Identities=12%  Similarity=0.112  Sum_probs=19.8

Q ss_pred             HHHHCCCCEEEECCCCHHHHHHHCCC
Q ss_conf             99963994089789327999996172
Q 537021.9.peg.8    7 QRYKKRFLPIIVGGTGLYFRALTGQL   32 (217)
Q Consensus         7 e~~~r~kiPIiVGGTglY~~all~g~   32 (217)
                      ++.++|++||++||-+--.-+.+.|+
T Consensus        86 ~i~~~g~~pi~lGGdHsit~~~~~a~  111 (322)
T 2aeb_A           86 EVKKNGRISLVLGGDHSLAIGSISGH  111 (322)
T ss_dssp             HHHHTTCEEEEEESCGGGHHHHHHHH
T ss_pred             HHHHCCCEEEEECCCCCCCCCHHHHH
T ss_conf             99967975899746887642035678


No 19 
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=37.59  E-value=18  Score=16.26  Aligned_cols=24  Identities=21%  Similarity=0.223  Sum_probs=18.6

Q ss_pred             HHHHHHHHHCCCCEEEECCCCHHH
Q ss_conf             468999996399408978932799
Q 537021.9.peg.8    2 LSKKLQRYKKRFLPIIVGGTGLYF   25 (217)
Q Consensus         2 ~~k~~e~~~r~kiPIiVGGTglY~   25 (217)
                      +...++.....++|+|+|=||+.-
T Consensus        58 ~~~~~~~~~~~~~plViGTTG~~~   81 (245)
T 1p9l_A           58 VMGNLEFLIDNGIHAVVGTTGFTA   81 (245)
T ss_dssp             HHHHHHHHHHTTCEEEECCCCCCH
T ss_pred             HHHHHHHHHHCCCEEEEECCCCCH
T ss_conf             999999999729479998898877


No 20 
>1pq3_A Arginase II, mitochondrial precursor; biosynthetic protein, hydrolase; HET: S2C; 2.70A {Homo sapiens} SCOP: c.42.1.1
Probab=37.11  E-value=14  Score=17.06  Aligned_cols=26  Identities=8%  Similarity=0.063  Sum_probs=20.0

Q ss_pred             HHHHCCCCEEEECCCCHHHHHHHCCC
Q ss_conf             99963994089789327999996172
Q 537021.9.peg.8    7 QRYKKRFLPIIVGGTGLYFRALTGQL   32 (217)
Q Consensus         7 e~~~r~kiPIiVGGTglY~~all~g~   32 (217)
                      ++.++|++||++||.+----+.+.++
T Consensus        82 ~~~~~g~~pivlGGdHsis~~~~~a~  107 (306)
T 1pq3_A           82 RAVSDGYSCVTLGGDHSLAIGTISGH  107 (306)
T ss_dssp             HHHHTTCEEEEEESSGGGHHHHHHHH
T ss_pred             HHHHCCCCEEEECCCCCCCCCHHHHH
T ss_conf             99968994267457876540048999


No 21 
>3llm_A ATP-dependent RNA helicase A; alpha-beta-alpha, structural genomics, structural genomics consortium, SGC, activator, ATP-binding, DNA-binding; HET: ADP; 2.80A {Homo sapiens}
Probab=36.81  E-value=18  Score=16.26  Aligned_cols=25  Identities=12%  Similarity=0.122  Sum_probs=15.3

Q ss_pred             EEEECCCHHHHHHHHHHHHHHHHHH
Q ss_conf             0010786789999999777654211
Q 537021.9.peg.8  114 KIIILPERSALKERIRRRFTQMLES  138 (217)
Q Consensus       114 ~i~l~~~r~~L~~rI~~R~~~Ml~~  138 (217)
                      .+++..||...-..+..|+-.....
T Consensus       111 ~I~~tqPRR~aa~s~A~rva~e~~~  135 (235)
T 3llm_A          111 NIVVTQPRRISAVSVAERVAFERGE  135 (235)
T ss_dssp             EEEEEESSHHHHHHHHHHHHHTTTC
T ss_pred             EEEEECCCHHHHHHHHHHHHHHHCC
T ss_conf             5999637379999999999998289


No 22 
>1gq6_A Proclavaminate amidino hydrolase; clavaminic, PAH, arginase, antibiotic; 1.75A {Streptomyces clavuligerus} SCOP: c.42.1.1 PDB: 1gq7_A
Probab=36.63  E-value=12  Score=17.41  Aligned_cols=26  Identities=15%  Similarity=0.018  Sum_probs=18.4

Q ss_pred             HHHHHHCCCCEEEECCCCHHHHHHHC
Q ss_conf             99999639940897893279999961
Q 537021.9.peg.8    5 KLQRYKKRFLPIIVGGTGLYFRALTG   30 (217)
Q Consensus         5 ~~e~~~r~kiPIiVGGTglY~~all~   30 (217)
                      ..++++.|++||+.||-+--.-+.+.
T Consensus       104 v~~~~~~~~~pi~LGGdHsit~~~~~  129 (313)
T 1gq6_A          104 LSGLLKANAAFLMIGGDHSLTVAALR  129 (313)
T ss_dssp             HHHHHHHSSEEEEEESCGGGHHHHHH
T ss_pred             HHHHHHCCCEEEEECCCCCCCCCCHH
T ss_conf             99998448705885887422322067


No 23 
>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2
Probab=36.39  E-value=11  Score=17.57  Aligned_cols=18  Identities=28%  Similarity=0.194  Sum_probs=13.2

Q ss_pred             CCCEEEECCCCHHHHHHH
Q ss_conf             994089789327999996
Q 537021.9.peg.8   12 RFLPIIVGGTGLYFRALT   29 (217)
Q Consensus        12 ~kiPIiVGGTglY~~all   29 (217)
                      .|+.+|+|||||==..|+
T Consensus         1 ~k~~LVTGatGfiG~~L~   18 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLA   18 (372)
T ss_dssp             CCEEEEETTTSHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHH
T ss_conf             988999488878999999


No 24 
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, JCSG, protein structure initiative, PSI; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=36.06  E-value=14  Score=17.07  Aligned_cols=26  Identities=27%  Similarity=0.259  Sum_probs=19.2

Q ss_pred             HHHHHHHHCCCCEEEECCCCHHHHHH
Q ss_conf             68999996399408978932799999
Q 537021.9.peg.8    3 SKKLQRYKKRFLPIIVGGTGLYFRAL   28 (217)
Q Consensus         3 ~k~~e~~~r~kiPIiVGGTglY~~al   28 (217)
                      .+.++...+.++|+|+|=||+--..+
T Consensus        67 ~~~l~~~~~~~~plViGTTG~~~~~~   92 (228)
T 1vm6_A           67 PKTVDLCKKYRAGLVLGTTALKEEHL   92 (228)
T ss_dssp             HHHHHHHHHHTCEEEECCCSCCHHHH
T ss_pred             HHHHHHHHHCCCCEEEEECCCCHHHH
T ss_conf             55689998638764998068887899


No 25 
>3mmr_A Arginase; malaria, ABH, LCR, parasite, L-arginine, boronic acid, metallohydrolase, binuclear, manganese, hydrolase; HET: ABH; 2.14A {Plasmodium falciparum 3D7}
Probab=34.57  E-value=14  Score=17.08  Aligned_cols=25  Identities=12%  Similarity=0.068  Sum_probs=17.1

Q ss_pred             HHHHCCCCEEEECCCCHHHHHHHCC
Q ss_conf             9996399408978932799999617
Q 537021.9.peg.8    7 QRYKKRFLPIIVGGTGLYFRALTGQ   31 (217)
Q Consensus         7 e~~~r~kiPIiVGGTglY~~all~g   31 (217)
                      ++.++|++||+.||-+----..+.|
T Consensus       180 ~~l~~g~~PIvLGGDHSia~g~v~g  204 (413)
T 3mmr_A          180 NELRKKNFVLNIGGDHGVAFSSILS  204 (413)
T ss_dssp             HHHTTTCEEEEEESSGGGHHHHHHH
T ss_pred             HHHHCCCEEEEEECCCHHHHHHHHH
T ss_conf             9996799689982762758999999


No 26 
>1woh_A Agmatinase; alpha/beta fold, hydrolase; 1.75A {Deinococcus radiodurans} SCOP: c.42.1.1 PDB: 1wog_A 1woi_A
Probab=34.43  E-value=21  Score=15.78  Aligned_cols=29  Identities=17%  Similarity=0.155  Sum_probs=22.1

Q ss_pred             HHHHHCCCCEEEECCCCHHHHHHHCCCCC
Q ss_conf             99996399408978932799999617244
Q 537021.9.peg.8    6 LQRYKKRFLPIIVGGTGLYFRALTGQLSI   34 (217)
Q Consensus         6 ~e~~~r~kiPIiVGGTglY~~all~g~~~   34 (217)
                      .+++++|++||+.||-+-=.-.++.++..
T Consensus       105 ~~~~~~~~~pi~lGGdHsit~~~~~al~~  133 (305)
T 1woh_A          105 RQVRGRCRVPVFLGGDHSVSYPLLRAFAD  133 (305)
T ss_dssp             HHHHTTEEEEEEEESSGGGHHHHHGGGTT
T ss_pred             HHHHHCCCCEEEECCCCCCCHHHHHHHHH
T ss_conf             99985898335506776640245666650


No 27 
>1lvg_A Guanylate kinase, GMP kinase; transferase; HET: ADP 5GP; 2.10A {Mus musculus} SCOP: c.37.1.1
Probab=34.40  E-value=16  Score=16.56  Aligned_cols=75  Identities=17%  Similarity=0.181  Sum_probs=37.8

Q ss_pred             HHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHH
Q ss_conf             10000107867899999997776542113456777751138631013442068567789867899989999999999998
Q 537021.9.peg.8  111 SAHKIIILPERSALKERIRRRFTQMLESGAIDEIRSLMKMNLSLDLPIMKAIGVRDIIALLKGEINYDETLQRGIIATNK  190 (217)
Q Consensus       111 ~~~~i~l~~~r~~L~~rI~~R~~~Ml~~GlieEv~~L~~~~~~~~~~~~~~IGYke~~~yL~g~~~~~e~~e~~~~~Tr~  190 (217)
                      .+.+|++.++.+.|.+|+..|-..     --++++.-++. ...+.....-.+   ..+++--+-+++++.+.+..-..+
T Consensus       117 ~~~I~~~~~~~e~l~~RL~~R~~~-----~~e~i~~Rl~~-~~~e~~~~~~~~---~~D~vI~N~dle~a~~~l~~iI~~  187 (198)
T 1lvg_A          117 PIYIFVQPPSLDVLEQRLRLRNTE-----TEESLAKRLAA-ARTDMESSKEPG---LFDLVIINDDLDKAYATLKQALSE  187 (198)
T ss_dssp             CEEEEEECSCHHHHHHHHHHHTCS-----CHHHHHHHHHH-HHHHTTGGGSTT---TCSEEEECSSHHHHHHHHHHHTHH
T ss_pred             CEEEEEECCCHHHHHHHHHHCCCC-----CHHHHHHHHHH-HHHHHHHCHHCC---CCCEEEECCCHHHHHHHHHHHHHH
T ss_conf             189999699989999999973898-----67899999999-999998444128---997899890999999999999999


Q ss_pred             HHHH
Q ss_conf             8888
Q 537021.9.peg.8  191 YAKR  194 (217)
Q Consensus       191 yAKR  194 (217)
                      ..||
T Consensus       188 ~~k~  191 (198)
T 1lvg_A          188 EIKK  191 (198)
T ss_dssp             HHHH
T ss_pred             HHHH
T ss_conf             9866


No 28 
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, lyase; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=33.99  E-value=14  Score=16.98  Aligned_cols=35  Identities=11%  Similarity=0.175  Sum_probs=21.6

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf             89998999999999999888887688628887531
Q 537021.9.peg.8  173 GEINYDETLQRGIIATNKYAKRQKTWLCHQFQADW  207 (217)
Q Consensus       173 g~~~~~e~~e~~~~~Tr~yAKRQ~TWfr~~~~~~w  207 (217)
                      -+++++++++.....--.+.|++.+--.+.+...|
T Consensus       336 P~~~leegi~~ti~~yl~~~k~~~~~~~~~~~~~~  370 (381)
T 1n7h_A          336 PQVGFEKLVKMMVDEDLELAKREKVLVDAGYMDAK  370 (381)
T ss_dssp             CCSCHHHHHHHHHHHHHHHHHHHHHHHHTTC----
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf             68889999999999999999715666538762025


No 29 
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=33.96  E-value=13  Score=17.16  Aligned_cols=21  Identities=24%  Similarity=0.251  Sum_probs=14.3

Q ss_pred             HHCC--CCEEEECCCCHHHHHHH
Q ss_conf             9639--94089789327999996
Q 537021.9.peg.8    9 YKKR--FLPIIVGGTGLYFRALT   29 (217)
Q Consensus         9 ~~r~--kiPIiVGGTglY~~all   29 (217)
                      |+++  |+-+|+|||||==..|+
T Consensus        19 ~~~~Mkk~~LITGatGfIGs~l~   41 (375)
T 1t2a_A           19 FQGHMRNVALITGITGQDGSYLA   41 (375)
T ss_dssp             -----CCEEEEETTTSHHHHHHH
T ss_pred             HHCCCCCEEEEECCCCHHHHHHH
T ss_conf             44079876999608628999999


No 30 
>1knq_A Gluconate kinase; ALFA/beta structure, transferase; 2.00A {Escherichia coli} SCOP: c.37.1.17 PDB: 1ko1_A 1ko4_A 1ko5_A* 1ko8_A* 1kof_A*
Probab=33.76  E-value=24  Score=15.45  Aligned_cols=67  Identities=7%  Similarity=0.126  Sum_probs=39.0

Q ss_pred             HHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHH-HHHHCCCCCHHHHHHHHHHHH
Q ss_conf             100001078678999999977765421134567777511386310134420685677-898678999899999999999
Q 537021.9.peg.8  111 SAHKIIILPERSALKERIRRRFTQMLESGAIDEIRSLMKMNLSLDLPIMKAIGVRDI-IALLKGEINYDETLQRGIIAT  188 (217)
Q Consensus       111 ~~~~i~l~~~r~~L~~rI~~R~~~Ml~~GlieEv~~L~~~~~~~~~~~~~~IGYke~-~~yL~g~~~~~e~~e~~~~~T  188 (217)
                      ....++|.++.+.+.+|+..|-.......+++.-...++.           ..+.|. .-.+++..+.++.++.+...-
T Consensus       104 ~~~~i~l~~~~e~~~~Rl~~R~~~~~~~~~~~~~~~~~e~-----------~~~~e~~~i~id~~~~~e~v~~~il~~l  171 (175)
T 1knq_A          104 NLSFIYLKGDFDVIESRLKARKGHFFKTQMLVTQFETLQE-----------PGADETDVLVVDIDQPLEGVVASTIEVI  171 (175)
T ss_dssp             TEEEEEEECCHHHHHHHHHTSTTCCCCHHHHHHHHHHCCC-----------CCTTCTTEEEEECSSCHHHHHHHHHHHH
T ss_pred             CCEEEEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHC-----------CCCCCCCEEEECCCCCHHHHHHHHHHHH
T ss_conf             8368751899999999998574789887889989998437-----------7777799899869899999999999999


No 31 
>2ef5_A Arginase; TTHA1496, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: LYS; 2.00A {Thermus thermophilus} PDB: 2ef4_A* 2eiv_A
Probab=33.64  E-value=10  Score=17.83  Aligned_cols=26  Identities=19%  Similarity=0.316  Sum_probs=16.6

Q ss_pred             HHHHHCCCCEEEECCCCHHHHHHHCC
Q ss_conf             99996399408978932799999617
Q 537021.9.peg.8    6 LQRYKKRFLPIIVGGTGLYFRALTGQ   31 (217)
Q Consensus         6 ~e~~~r~kiPIiVGGTglY~~all~g   31 (217)
                      .+.+++|++||++||-+--.-+.+.+
T Consensus        80 ~~~l~~g~~pi~lGGdHsit~~~~~a  105 (290)
T 2ef5_A           80 LAALPEGVFPIVLGGDHSLSMGSVAG  105 (290)
T ss_dssp             HHTSCTTEEEEEEESSGGGHHHHHHH
T ss_pred             HHHHHCCCEEEEECCCCHHHHHHHHC
T ss_conf             86762597569966864245999864


No 32 
>2pt5_A Shikimate kinase, SK; aromatic amino acid biosynthesis, P-loop kinase, shikimate pathway, nucleotide-binding, amino-acid biosynthesis; 2.10A {Aquifex aeolicus VF5}
Probab=33.06  E-value=6.2  Score=19.31  Aligned_cols=67  Identities=19%  Similarity=0.211  Sum_probs=40.6

Q ss_pred             HEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf             0000107867899999997776542113456777751138631013442068567789867899989999999999
Q 537021.9.peg.8  112 AHKIIILPERSALKERIRRRFTQMLESGAIDEIRSLMKMNLSLDLPIMKAIGVRDIIALLKGEINYDETLQRGIIA  187 (217)
Q Consensus       112 ~~~i~l~~~r~~L~~rI~~R~~~Ml~~GlieEv~~L~~~~~~~~~~~~~~IGYke~~~yL~g~~~~~e~~e~~~~~  187 (217)
                      ...++|.++.+.+.+|+..|-+..+-+...++++.++...    .|.     |+++---++.+.+.++.++.+...
T Consensus        94 ~~~v~L~~~~e~~~~Rl~~~~~Rp~l~~~~~~~~~~~~~R----~~~-----Y~~ad~~Idt~~~~eeiv~~Il~~  160 (168)
T 2pt5_A           94 GTTVFIDIPFEVFLERCKDSKERPLLKRPLDEIKNLFEER----RKI-----YSKADIKVKGEKPPEEVVKEILLS  160 (168)
T ss_dssp             SEEEEEECCHHHHHHHCBCTTCCBGGGSCGGGTHHHHHHH----HHH-----HTTSSEEEECSSCHHHHHHHHHHH
T ss_pred             CCEEEEECCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH----HHH-----HHHCCEEEECCCCHHHHHHHHHHH
T ss_conf             8337873588998888524788867468599999999998----999-----984999997989999999999999


No 33 
>1u83_A Phosphosulfolactate synthase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, lyase; 2.20A {Bacillus subtilis} SCOP: c.1.27.1
Probab=32.71  E-value=25  Score=15.34  Aligned_cols=77  Identities=13%  Similarity=0.217  Sum_probs=41.5

Q ss_pred             HHHHHHHHHCCCCEEEECCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHH
Q ss_conf             46899999639940897893279999961724488999899999999999622355566553116232023570156999
Q 537021.9.peg.8    2 LSKKLQRYKKRFLPIIVGGTGLYFRALTGQLSIMPEIPTAIREKIREKLKQYGSHILHDELSSLDSIVARQIHPSDGQRI   81 (217)
Q Consensus         2 ~~k~~e~~~r~kiPIiVGGTglY~~all~g~~~~p~~~~~ir~~~~~~~~~~g~~~l~~~L~~~DP~~a~~i~~nd~~Ri   81 (217)
                      +.++|+...+..|++..||| |.-.|+..|-     +     ++..+...+.|-+.+     ++ ....-.+...++.|+
T Consensus        82 L~eKI~l~~~~~V~v~~GGT-lfE~a~~q~~-----~-----d~yl~~~k~lGf~~I-----EI-SdGsi~i~~~~~~~~  144 (276)
T 1u83_A           82 LEEKISTLKEHDITFFFGGT-LFEKYVSQKK-----V-----NEFHRYCTYFGCEYI-----EI-SNGTLPMTNKEKAAY  144 (276)
T ss_dssp             HHHHHHHHHHTTCEEEECHH-HHHHHHHTTC-----H-----HHHHHHHHHTTCSEE-----EE-CCSSSCCCHHHHHHH
T ss_pred             HHHHHHHHHHCCCEEECCCH-HHHHHHHHCC-----H-----HHHHHHHHHCCCCEE-----EE-CCCCCCCCHHHHHHH
T ss_conf             99999999986996978968-9999998188-----9-----999999998599889-----97-898012898999999


Q ss_pred             HHHHHHHHHCCCCHHHH
Q ss_conf             99999985348874677
Q 537021.9.peg.8   82 ARALEIKLVSGQSIIEF   98 (217)
Q Consensus        82 ~RaLEi~~~tGk~~s~~   98 (217)
                      +++..   ..+..++|.
T Consensus       145 I~~~~---~~~~V~sEv  158 (276)
T 1u83_A          145 IADFS---DEFLVLSEV  158 (276)
T ss_dssp             HHHHT---TTSEEEEEC
T ss_pred             HHHHH---HCCEECCCC
T ss_conf             99998---549345435


No 34 
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=32.68  E-value=25  Score=15.33  Aligned_cols=27  Identities=22%  Similarity=0.263  Sum_probs=18.3

Q ss_pred             HHHHHHH-CCCCEEEECCCCHHHHHHHC
Q ss_conf             8999996-39940897893279999961
Q 537021.9.peg.8    4 KKLQRYK-KRFLPIIVGGTGLYFRALTG   30 (217)
Q Consensus         4 k~~e~~~-r~kiPIiVGGTglY~~all~   30 (217)
                      |.-+.|+ .+|.-+|+||||+==++|+.
T Consensus         9 ~~~~~~~M~~kkILVtGatG~iG~~lv~   36 (242)
T 2bka_A            9 KLREDFRMQNKSVFILGASGETGRVLLK   36 (242)
T ss_dssp             HHHHHHHHTCCEEEEECTTSHHHHHHHH
T ss_pred             HHHHHCCCCCCEEEEECCCCHHHHHHHH
T ss_conf             6788607789969999998499999999


No 35 
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=30.79  E-value=17  Score=16.37  Aligned_cols=20  Identities=15%  Similarity=0.310  Sum_probs=15.3

Q ss_pred             HCCCCEEEECCCCHHHHHHH
Q ss_conf             63994089789327999996
Q 537021.9.peg.8   10 KKRFLPIIVGGTGLYFRALT   29 (217)
Q Consensus        10 ~r~kiPIiVGGTglY~~all   29 (217)
                      .+||.-+|+|||||==..|+
T Consensus         9 ~~gk~VLVTG~tGfIGs~l~   28 (342)
T 1y1p_A            9 PEGSLVLVTGANGFVASHVV   28 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHH
T ss_conf             99599999899789999999


No 36 
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'- deoxyadenosine, radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=29.07  E-value=22  Score=15.66  Aligned_cols=21  Identities=5%  Similarity=-0.032  Sum_probs=7.6

Q ss_pred             EEEECCCHHHH-HHHHHHHHHH
Q ss_conf             00107867899-9999977765
Q 537021.9.peg.8  114 KIIILPERSAL-KERIRRRFTQ  134 (217)
Q Consensus       114 ~i~l~~~r~~L-~~rI~~R~~~  134 (217)
                      -++...+.+.+ ..-++..++.
T Consensus       162 ~LG~~vp~ee~v~~a~e~~aD~  183 (262)
T 1xrs_B          162 NLGSQVANEDFIKKAVELEADV  183 (262)
T ss_dssp             ECCSSBCHHHHHHHHHHTTCSE
T ss_pred             ECCCCCCHHHHHHHHHHCCCCE
T ss_conf             6888999999999998649999


No 37 
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genomics, NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus VF5} PDB: 2z95_A*
Probab=29.03  E-value=19  Score=16.10  Aligned_cols=18  Identities=22%  Similarity=0.017  Sum_probs=12.4

Q ss_pred             CCCCEEEECCCCHHHHHH
Q ss_conf             399408978932799999
Q 537021.9.peg.8   11 KRFLPIIVGGTGLYFRAL   28 (217)
Q Consensus        11 r~kiPIiVGGTglY~~al   28 (217)
                      +||--+|+|||||==.+|
T Consensus         2 ~~KkilVTG~tGfIGs~l   19 (345)
T 2z1m_A            2 SGKRALITGIRGQDGAYL   19 (345)
T ss_dssp             -CCEEEEETTTSHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHH
T ss_conf             709899989987899999


No 38 
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoid, oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=28.75  E-value=18  Score=16.22  Aligned_cols=20  Identities=25%  Similarity=0.333  Sum_probs=13.9

Q ss_pred             HCCCCEEEECCCCHHHHHHHC
Q ss_conf             639940897893279999961
Q 537021.9.peg.8   10 KKRFLPIIVGGTGLYFRALTG   30 (217)
Q Consensus        10 ~r~kiPIiVGGTglY~~all~   30 (217)
                      .++|| +|+||||+==.+++.
T Consensus         9 ~k~KV-lV~GaTG~iG~~lv~   28 (346)
T 3i6i_A            9 PKGRV-LIAGATGFIGQFVAT   28 (346)
T ss_dssp             --CCE-EEECTTSHHHHHHHH
T ss_pred             CCCEE-EEECCCCHHHHHHHH
T ss_conf             99919-998989689999999


No 39 
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=27.90  E-value=11  Score=17.56  Aligned_cols=18  Identities=28%  Similarity=0.396  Sum_probs=11.6

Q ss_pred             CCCCEEEECCCCHHHHHHH
Q ss_conf             3994089789327999996
Q 537021.9.peg.8   11 KRFLPIIVGGTGLYFRALT   29 (217)
Q Consensus        11 r~kiPIiVGGTglY~~all   29 (217)
                      +.|| +|+|||||==..|+
T Consensus         3 ~KkI-lITG~tGfiG~~l~   20 (321)
T 1e6u_A            3 KQRV-FIAGHRGMVGSAIR   20 (321)
T ss_dssp             CEEE-EEETTTSHHHHHHH
T ss_pred             CCEE-EEECCCCHHHHHHH
T ss_conf             8869-99848748999999


No 40 
>1pgy_A SWA2P; UBA, ubiquitin, auxilin, ubiquitin-associated domain, protein binding; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1
Probab=27.42  E-value=22  Score=15.72  Aligned_cols=40  Identities=13%  Similarity=0.406  Sum_probs=25.3

Q ss_pred             HHHHHHHHHHCCCCCHHHHHHCCC--HHHHHHHHCCCCCHHHHHHHHHH
Q ss_conf             456777751138631013442068--56778986789998999999999
Q 537021.9.peg.8  140 AIDEIRSLMKMNLSLDLPIMKAIG--VRDIIALLKGEINYDETLQRGII  186 (217)
Q Consensus       140 lieEv~~L~~~~~~~~~~~~~~IG--Yke~~~yL~g~~~~~e~~e~~~~  186 (217)
                      +++||+.+-       ..-+.|+|  .-++..|-+..+.+|+.++..++
T Consensus         2 ~VDEVkDME-------iAkLMSLGl~id~A~~~Ye~gi~ye~~i~~~k~   43 (47)
T 1pgy_A            2 LVDEVKDME-------IARLMSLGLSIEEATEFYENDVTYERYLEILKS   43 (47)
T ss_dssp             CSHHHHHHH-------HHHHHHHCCCSHHHHHHHHHHCSSHHHHHHHHH
T ss_pred             HHHHHHHHH-------HHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHH
T ss_conf             015998899-------999998127856778999746449999999987


No 41 
>2x6t_A AGME,, ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=26.91  E-value=20  Score=15.92  Aligned_cols=18  Identities=22%  Similarity=0.429  Sum_probs=12.6

Q ss_pred             CCCCEEEECCCCHHHHHH
Q ss_conf             399408978932799999
Q 537021.9.peg.8   11 KRFLPIIVGGTGLYFRAL   28 (217)
Q Consensus        11 r~kiPIiVGGTglY~~al   28 (217)
                      +||--+|+|||||==..|
T Consensus        45 ~~KkILVTGgtGfIGs~l   62 (357)
T 2x6t_A           45 EGRMIIVTGGAGFIGSNI   62 (357)
T ss_dssp             ---CEEEETTTSHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHH
T ss_conf             979999948987899999


No 42 
>2waq_Q DNA-directed RNA polymerase RPO13 subunit; multi-subunit, transcription; 3.35A {Sulfolobus shibatae} PDB: 2wb1_J
Probab=26.61  E-value=17  Score=16.42  Aligned_cols=26  Identities=35%  Similarity=0.392  Sum_probs=21.5

Q ss_pred             HHCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             86789998999999999999888887
Q 537021.9.peg.8  170 LLKGEINYDETLQRGIIATNKYAKRQ  195 (217)
Q Consensus       170 yL~g~~~~~e~~e~~~~~Tr~yAKRQ  195 (217)
                      .|+|++|.+|+...+.-+-+.|.||-
T Consensus        54 Ll~gkiSieEAKk~Fed~~~~Y~K~D   79 (104)
T 2waq_Q           54 LLNGKISVDEAKRLFEDNYKDYEKRD   79 (104)
T ss_dssp             TTCCSSSHHHHHHHHHHHHTTTTCCC
T ss_pred             HHCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf             87575339999999999899988878


No 43 
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=26.48  E-value=26  Score=15.20  Aligned_cols=21  Identities=19%  Similarity=0.142  Sum_probs=14.1

Q ss_pred             HHCCCCEEEECCCCHHHHHHH
Q ss_conf             963994089789327999996
Q 537021.9.peg.8    9 YKKRFLPIIVGGTGLYFRALT   29 (217)
Q Consensus         9 ~~r~kiPIiVGGTglY~~all   29 (217)
                      |=+||--+|+|||||==..|+
T Consensus         6 ~~~~KkILVTGgtGfIGs~L~   26 (357)
T 1rkx_A            6 FWQGKRVFVTGHTGFKGGWLS   26 (357)
T ss_dssp             HHTTCEEEEETTTSHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHH
T ss_conf             579598999689978999999


No 44 
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=26.09  E-value=24  Score=15.51  Aligned_cols=20  Identities=25%  Similarity=0.424  Sum_probs=14.5

Q ss_pred             CCCCEEEECCCCHHHHHHHC
Q ss_conf             39940897893279999961
Q 537021.9.peg.8   11 KRFLPIIVGGTGLYFRALTG   30 (217)
Q Consensus        11 r~kiPIiVGGTglY~~all~   30 (217)
                      +||.-+|+|||||==..|+.
T Consensus        20 ~nK~ILVTGg~GfiGs~lv~   39 (344)
T 2gn4_A           20 DNQTILITGGTGSFGKCFVR   39 (344)
T ss_dssp             TTCEEEEETTTSHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHH
T ss_conf             86999998988789999999


No 45 
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=25.42  E-value=24  Score=15.43  Aligned_cols=20  Identities=30%  Similarity=0.419  Sum_probs=14.8

Q ss_pred             CCCCEEEECCCCHHHHHHHC
Q ss_conf             39940897893279999961
Q 537021.9.peg.8   11 KRFLPIIVGGTGLYFRALTG   30 (217)
Q Consensus        11 r~kiPIiVGGTglY~~all~   30 (217)
                      ..|.-+|+|||||==.+|+.
T Consensus         8 ~~K~vlVTGatGfIG~~l~~   27 (338)
T 2rh8_A            8 GKKTACVVGGTGFVASLLVK   27 (338)
T ss_dssp             -CCEEEEECTTSHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHH
T ss_conf             99989997797399999999


No 46 
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=25.39  E-value=20  Score=16.02  Aligned_cols=18  Identities=39%  Similarity=0.613  Sum_probs=12.5

Q ss_pred             CCCCEEEECCCCHHHHHHH
Q ss_conf             3994089789327999996
Q 537021.9.peg.8   11 KRFLPIIVGGTGLYFRALT   29 (217)
Q Consensus        11 r~kiPIiVGGTglY~~all   29 (217)
                      |.|| +|+||||+-=..++
T Consensus         4 k~KI-LVtGatG~iG~~l~   21 (313)
T 1qyd_A            4 KSRV-LIVGGTGYIGKRIV   21 (313)
T ss_dssp             CCCE-EEESTTSTTHHHHH
T ss_pred             CCEE-EEECCCCHHHHHHH
T ss_conf             9989-99899848999999


No 47 
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=25.38  E-value=20  Score=16.02  Aligned_cols=19  Identities=21%  Similarity=0.462  Sum_probs=13.4

Q ss_pred             CCCCEEEECCCCHHHHHHHC
Q ss_conf             39940897893279999961
Q 537021.9.peg.8   11 KRFLPIIVGGTGLYFRALTG   30 (217)
Q Consensus        11 r~kiPIiVGGTglY~~all~   30 (217)
                      +.|| +|+||||+==.+|+.
T Consensus         4 k~kI-LVtGatG~iG~~lv~   22 (308)
T 1qyc_A            4 RSRI-LLIGATGYIGRHVAK   22 (308)
T ss_dssp             CCCE-EEESTTSTTHHHHHH
T ss_pred             CCEE-EEECCCCHHHHHHHH
T ss_conf             9979-998988389999999


No 48 
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=25.02  E-value=18  Score=16.35  Aligned_cols=20  Identities=15%  Similarity=0.134  Sum_probs=14.2

Q ss_pred             HCCCCEEEECCCCHHHHHHH
Q ss_conf             63994089789327999996
Q 537021.9.peg.8   10 KKRFLPIIVGGTGLYFRALT   29 (217)
Q Consensus        10 ~r~kiPIiVGGTglY~~all   29 (217)
                      ..||.-+|+|||||==.+|+
T Consensus         3 ~~~k~VlITGatGfiG~~l~   22 (337)
T 2c29_D            3 SQSETVCVTGASGFIGSWLV   22 (337)
T ss_dssp             ---CEEEETTTTSHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHH
T ss_conf             99988999889869999999


No 49 
>2qt1_A Nicotinamide riboside kinase 1; non-protein kinase, NAD+, NRK1, nicotinic acid riboside kinase activity, NAD biosynthesis; HET: NNR; 1.32A {Homo sapiens} PDB: 2qsy_A* 2qsz_A* 2qt0_A* 2p0e_A* 2qg6_A* 2ql6_A*
Probab=23.97  E-value=32  Score=14.65  Aligned_cols=71  Identities=11%  Similarity=-0.027  Sum_probs=33.9

Q ss_pred             EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf             000107867899999997776542113456777751138631013442068567789867899989999999999
Q 537021.9.peg.8  113 HKIIILPERSALKERIRRRFTQMLESGAIDEIRSLMKMNLSLDLPIMKAIGVRDIIALLKGEINYDETLQRGIIA  187 (217)
Q Consensus       113 ~~i~l~~~r~~L~~rI~~R~~~Ml~~GlieEv~~L~~~~~~~~~~~~~~IGYke~~~yL~g~~~~~e~~e~~~~~  187 (217)
                      ++|+|+.|.+++.+|+.+|-..  ....++.-.......+.......+...  ..+-+++|..+.++....+...
T Consensus       132 ~~Ifld~~~e~~~~R~~~R~~~--~~~~~~~~~~~~~~~y~~~~~~~~~~~--~~ii~id~~~s~e~i~~~I~~~  202 (207)
T 2qt1_A          132 RSYFLTIPYEECKRRRSTRVYQ--PPDSPGYFDGHVWPMYLKYRQEMQDIT--WEVVYLDGTKSEEDLFLQVYED  202 (207)
T ss_dssp             EEEEEECCHHHHHHHHHHSCCS--SCCCTTHHHHTHHHHHHHHHHHGGGCS--SCCEEEETTSCHHHHHHHHHHH
T ss_pred             EEEEEECCHHHHHHHHHHCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHCC--CEEEECCCCCCHHHHHHHHHHH
T ss_conf             5799988989999999975999--875599999999899999987888548--8699899988999999999999


No 50 
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix bundle (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=22.59  E-value=38  Score=14.18  Aligned_cols=14  Identities=0%  Similarity=-0.202  Sum_probs=5.5

Q ss_pred             EEECCCHHHHHHHH
Q ss_conf             01078678999999
Q 537021.9.peg.8  115 IIILPERSALKERI  128 (217)
Q Consensus       115 i~l~~~r~~L~~rI  128 (217)
                      ++.+.|.+.+-+.+
T Consensus       157 LG~~~p~e~i~~~v  170 (258)
T 2i2x_B          157 LGRDVPAEEVLAAV  170 (258)
T ss_dssp             EEEECCSHHHHHHH
T ss_pred             CCCCCCHHHHHHHH
T ss_conf             89989999999999


No 51 
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=22.47  E-value=26  Score=15.18  Aligned_cols=19  Identities=32%  Similarity=0.475  Sum_probs=13.5

Q ss_pred             CCCCEEEECCCCHHHHHHHC
Q ss_conf             39940897893279999961
Q 537021.9.peg.8   11 KRFLPIIVGGTGLYFRALTG   30 (217)
Q Consensus        11 r~kiPIiVGGTglY~~all~   30 (217)
                      +.|| +|+||||+==.+|+.
T Consensus        11 k~KI-lVtGatG~iG~~l~~   29 (318)
T 2r6j_A           11 KSKI-LIFGGTGYIGNHMVK   29 (318)
T ss_dssp             CCCE-EEETTTSTTHHHHHH
T ss_pred             CCEE-EEECCCCHHHHHHHH
T ss_conf             9839-998999689999999


No 52 
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium frigidimaris KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=22.43  E-value=29  Score=14.89  Aligned_cols=17  Identities=29%  Similarity=0.403  Sum_probs=11.9

Q ss_pred             CCCEEEECCCCHHHHHHH
Q ss_conf             994089789327999996
Q 537021.9.peg.8   12 RFLPIIVGGTGLYFRALT   29 (217)
Q Consensus        12 ~kiPIiVGGTglY~~all   29 (217)
                      .|| +|+|||||==..|+
T Consensus         3 kKI-LItG~sGfiG~~l~   19 (312)
T 2yy7_A            3 PKI-LIIGACGQIGTELT   19 (312)
T ss_dssp             CCE-EEETTTSHHHHHHH
T ss_pred             CEE-EEECCCCHHHHHHH
T ss_conf             709-99758988999999


No 53 
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, GALE, NAD, SYK, UDP, N- acetylglucosamine, N-acetylgalactosamine, UDP-GLC; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=22.40  E-value=28  Score=15.00  Aligned_cols=19  Identities=21%  Similarity=0.172  Sum_probs=13.4

Q ss_pred             CCCCEEEECCCCHHHHHHH
Q ss_conf             3994089789327999996
Q 537021.9.peg.8   11 KRFLPIIVGGTGLYFRALT   29 (217)
Q Consensus        11 r~kiPIiVGGTglY~~all   29 (217)
                      .-|+-+|+|||||==..|+
T Consensus        26 ~~K~~LVTG~tGfIGs~lv   44 (352)
T 1sb8_A           26 QPKVWLITGVAGFIGSNLL   44 (352)
T ss_dssp             SCCEEEEETTTSHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHH
T ss_conf             9998999678878999999


No 54 
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=22.19  E-value=27  Score=15.10  Aligned_cols=19  Identities=26%  Similarity=0.340  Sum_probs=13.3

Q ss_pred             CCCCEEEECCCCHHHHHHHC
Q ss_conf             39940897893279999961
Q 537021.9.peg.8   11 KRFLPIIVGGTGLYFRALTG   30 (217)
Q Consensus        11 r~kiPIiVGGTglY~~all~   30 (217)
                      ++|| +|+||||+==.+|+.
T Consensus         2 ~~KI-LVtGatG~iG~~lv~   20 (307)
T 2gas_A            2 ENKI-LILGPTGAIGRHIVW   20 (307)
T ss_dssp             CCCE-EEESTTSTTHHHHHH
T ss_pred             CCEE-EEECCCCHHHHHHHH
T ss_conf             8879-998998489999999


No 55 
>3hkz_Y DNA-directed RNA polymerase subunit 13; archaea, metal-binding, nucleotidyltransferase, transcription, transferase, zinc, zinc-finger; 3.40A {Sulfolobus solfataricus}
Probab=22.09  E-value=17  Score=16.38  Aligned_cols=27  Identities=30%  Similarity=0.367  Sum_probs=20.9

Q ss_pred             HHHCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             986789998999999999999888887
Q 537021.9.peg.8  169 ALLKGEINYDETLQRGIIATNKYAKRQ  195 (217)
Q Consensus       169 ~yL~g~~~~~e~~e~~~~~Tr~yAKRQ  195 (217)
                      ..|+|+++.+++...+.-+-+.|.||-
T Consensus        53 ~Ll~gkiSieEAKk~Fed~~~~Y~K~D   79 (104)
T 3hkz_Y           53 NLLNGKITLEEAKKLFEDNYKEYEKRD   79 (104)
T ss_dssp             HTTCCSSHHHHHHHHHHHHHTTTTCCC
T ss_pred             HHHCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf             987575339999999999899988877


No 56 
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=21.53  E-value=40  Score=14.04  Aligned_cols=29  Identities=24%  Similarity=0.301  Sum_probs=21.6

Q ss_pred             HHHHHHHHHCCCCEEEECCCCHHHHHHHCC
Q ss_conf             468999996399408978932799999617
Q 537021.9.peg.8    2 LSKKLQRYKKRFLPIIVGGTGLYFRALTGQ   31 (217)
Q Consensus         2 ~~k~~e~~~r~kiPIiVGGTglY~~all~g   31 (217)
                      +.++|+...+..|++..|||-|= .++..|
T Consensus        57 L~eKI~l~~~~~V~v~~GGtlfE-~a~~q~   85 (251)
T 1qwg_A           57 VKEKINYYKDWGIKVYPGGTLFE-YAYSKG   85 (251)
T ss_dssp             HHHHHHHHHTTTCEEEECHHHHH-HHHHTT
T ss_pred             HHHHHHHHHHCCCEEECCCHHHH-HHHHCC
T ss_conf             99999999986982757957999-999749


No 57 
>2jb0_B Colicin E7; hydrolase/inhibitor, hydrolase/inhibitor complex, zinc, toxin, plasmid, nuclease, hydrolase, antibiotic, H-N-H motif, bacteriocin; 1.91A {Escherichia coli} SCOP: d.4.1.1 PDB: 3fbd_A 2jaz_B 2jbg_B 3gkl_A 3gjn_B 1pt3_A 2ivh_A 1ujz_B 2erh_B
Probab=20.38  E-value=42  Score=13.88  Aligned_cols=47  Identities=19%  Similarity=0.455  Sum_probs=33.6

Q ss_pred             CCCHHHHHHHHH----HHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHH
Q ss_conf             999899999999----9996223555665531162320235701569999999
Q 537021.9.peg.8   37 EIPTAIREKIRE----KLKQYGSHILHDELSSLDSIVARQIHPSDGQRIARAL   85 (217)
Q Consensus        37 ~~~~~ir~~~~~----~~~~~g~~~l~~~L~~~DP~~a~~i~~nd~~Ri~RaL   85 (217)
                      ++|..|..+|+-    .++.. .+++|.+..+ ||+.+....++|..|+.+..
T Consensus        30 piP~~IadkLrGr~F~sFd~F-R~afW~eVa~-Dp~L~~QF~~~N~~rmk~G~   80 (131)
T 2jb0_B           30 PVPDRIANKLRDKEFKSFDDF-RKKFWEEVSK-DPELSKQFSRNNNDRMKVGK   80 (131)
T ss_dssp             ECBHHHHHHHTTCEESSHHHH-HHHHHHHHHH-CHHHHTTSCHHHHHHHHTTC
T ss_pred             CCCHHHHHHHCCCCCCCHHHH-HHHHHHHHHH-CHHHHHHHCHHHHHHHHCCC
T ss_conf             787899998668857888999-9999999831-99999985888899987789


No 58 
>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, , isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2
Probab=20.14  E-value=36  Score=14.32  Aligned_cols=24  Identities=21%  Similarity=0.274  Sum_probs=16.9

Q ss_pred             HHHHHCCCCEEEECCCCHHHHHHH
Q ss_conf             999963994089789327999996
Q 537021.9.peg.8    6 LQRYKKRFLPIIVGGTGLYFRALT   29 (217)
Q Consensus         6 ~e~~~r~kiPIiVGGTglY~~all   29 (217)
                      ++-...+|+-+|+|||||==..|+
T Consensus         5 ~~~~~~~K~ILITGatGFIGs~Lv   28 (699)
T 1z45_A            5 LQSESTSKIVLVTGGAGYIGSHTV   28 (699)
T ss_dssp             ------CCEEEEETTTSHHHHHHH
T ss_pred             HHCCCCCCEEEEECCCCHHHHHHH
T ss_conf             647799998999589848999999


Done!