RPSBLAST alignment of GI: peg_888 and protein with PDBid: 3d3q

>3d3q_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2; 2.70A {Staphylococcus epidermidis atcc 12228} Length = 340

 Score =  119 bits (298), Expect = 7e-28
 Identities = 54/212 (25%), Positives = 103/212 (48%), Gaps = 7/212 (3%)

Query: 7   QRYKKRFLPIIVGGTGLYFRALTGQLSIMPEIPTAIREKIREKLKQY----GSHILHDEL 62
              ++  +PII GGTGLY ++L    +   E  +  + K  +   +      ++ LH+ L
Sbjct: 91  DITRRGKVPIIAGGTGLYIQSLLYNYAFEDESISEDKMKQVKLKLKELEHLNNNKLHEYL 150

Query: 63  SSLDSIVARQIHPSDGQRIARALEIKLVSGQSIIEFWKQAPNPFIPLESAHKIIILPERS 122
           +S D   A+ IHP++ +R+ RA+E  L + + +    ++    F        I I   R 
Sbjct: 151 ASFDKESAKDIHPNNRKRVLRAIEYYLKTKKLL--SSRKKVQQFTENYDTLLIGIEMSRE 208

Query: 123 ALKERIRRRFTQMLESGAIDEIRSLMKMNLSLDLPIMKAIGVRDIIALLKGEINYDETLQ 182
            L  RI +R   ML  G  +E++ L++         M+AIG ++++ ++KG I+ +  ++
Sbjct: 209 TLYLRINKRVDIMLGHGLFNEVQHLVEQGFEAS-QSMQAIGYKELVPVIKGNISMENAVE 267

Query: 183 RGIIATNKYAKRQKTWLCHQFQADWIRISSID 214
           +    + +YAKRQ TW  ++    W+    + 
Sbjct: 268 KLKQHSRQYAKRQLTWFKNKMNVHWLNKERMS 299