RPSBLAST alignment of GI: peg_888 and protein with PDBid: 3exa

>3exa_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacillus halodurans} PDB: 2qgn_A Length = 322

 Score =  105 bits (263), Expect = 8e-24
 Identities = 63/207 (30%), Positives = 103/207 (49%), Gaps = 3/207 (1%)

Query: 9   YKKRFLPIIVGGTGLYFRALT-GQLSIMPEIPTAIREKIREKLKQYGSHILHDELSSLDS 67
           +++  LP +VGGTGLY  A+               R ++   +  YG   LHD+LS +D 
Sbjct: 89  HERGRLPFLVGGTGLYVNAVIHQFNLGDIRADEDYRHELEAFVNSYGVQALHDKLSKIDP 148

Query: 68  IVARQIHPSDGQRIARALEIKLVSGQSIIEFWKQAPNPFIPLESAHKIIILPERSALKER 127
             A  IHP++ +R+ RALEI  ++G+++ E  +       P      I +  ER  L +R
Sbjct: 149 KAAAAIHPNNYRRVIRALEIIKLTGKTVTEQARHEEETPSPYNL-VMIGLTMERDVLYDR 207

Query: 128 IRRRFTQMLESGAIDEIRSLMKMNLSLDLPIMKAIGVRDIIALLKGEINYDETLQRGIIA 187
           I RR  QM+E G IDE + L    +      ++AIG +++   L G +  +E +      
Sbjct: 208 INRRVDQMVEEGLIDEAKKLYDRGIRDC-QSVQAIGYKEMYDYLDGNVTLEEAIDTLKRN 266

Query: 188 TNKYAKRQKTWLCHQFQADWIRISSID 214
           + +YAKRQ TW  ++    W  ++ +D
Sbjct: 267 SRRYAKRQLTWFRNKANVTWFDMTDVD 293