HHsearch alignment of GI: peg_91 and MMDB domain: 1j6o_A_

>1j6o_A (A:) TATD-related deoxyribonuclease; structural genomics, TM0667, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.80A {Thermotoga maritima}
Probab=98.33  E-value=1.9e-07  Score=63.63  Aligned_cols=43  Identities=23%  Similarity=0.496  Sum_probs=40.2

Q ss_pred             CEEEEECCCCCHHHHCCHHHHHHHHHHCCCCEEEEEEEEEHHE
Q ss_conf             9176424888646506889999999986998899964330320
Q 537021.9.peg.9    1 MLINTHCHFLLPDFDEDRHNVIMRAHQANVLKMIAIAIKVIRT   43 (46)
Q Consensus         1 MliDtHcHL~~~~f~~d~d~vi~ra~~~gV~~~i~v~~~~~~s   43 (46)
                      |+||+|||++.+.+..++++++++++++||++++++|++....
T Consensus        12 ~iID~H~H~~~~~~~~~~~~~l~~~~~~gi~~~v~~~~~~~~~   54 (268)
T 1j6o_A           12 HXVDTHAHLHFHQFDDDRNAVISSFEENNIEFVVNVGVNLEDS   54 (268)
T ss_dssp             CEEEEEECTTSGGGTTTHHHHHHTTTTTTEEEEEEECSSHHHH
T ss_pred             CEEEECCCCCCHHHCCCHHHHHHHHHHCCCCEEEEECCCHHHH
T ss_conf             6798544689824466999999999977999899902999999