RPS-BLAST 2.2.22 [Sep-27-2009] Database: pdb70 24,244 sequences; 5,693,230 total letters Searching..................................................done Query= 537021.9.peg.911_1 (47 letters) >3fho_A ATP-dependent RNA helicase DBP5; mRNA export, ATPase, translation termination, ATP-binding, cytoplasm, hydrolase, membrane; 2.80A {Schizosaccharomyces pombe} Length = 508 Score = 26.2 bits (57), Expect = 1.7 Identities = 9/15 (60%), Positives = 11/15 (73%) Query: 8 ERYAKGANRIRLKVK 22 ER+A AN IRLK + Sbjct: 310 ERFAPNANEIRLKTE 324 Database: pdb70 Posted date: Jan 26, 2011 11:21 AM Number of letters in database: 5,693,230 Number of sequences in database: 24,244 Lambda K H 0.325 0.140 0.373 Gapped Lambda K H 0.267 0.0521 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 24244 Number of Hits to DB: 346,930 Number of extensions: 9270 Number of successful extensions: 26 Number of sequences better than 10.0: 1 Number of HSP's gapped: 26 Number of HSP's successfully gapped: 1 Length of query: 47 Length of database: 5,693,230 Length adjustment: 20 Effective length of query: 27 Effective length of database: 5,208,350 Effective search space: 140625450 Effective search space used: 140625450 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.6 bits) S2: 50 (23.5 bits)