RPS-BLAST 2.2.22 [Sep-27-2009]

Database: CddB 
           21,608 sequences; 5,994,473 total letters

Searching..................................................done

Query= 537021.9.peg.913_1
         (102 letters)



>gnl|CDD|177810 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxygenase family
           protein.
          Length = 348

 Score = 26.1 bits (57), Expect = 2.4
 Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 9/42 (21%)

Query: 68  GRGELFKLSSS---------MPHGFIALLTNNIVKIVKYFFI 100
           GR EL KL S+         M HG      + I K+ K FF 
Sbjct: 60  GREELSKLHSALSTWGVVQVMNHGITEAFLDKIYKLTKQFFA 101


>gnl|CDD|151295 pfam10846, DUF2722, Protein of unknown function (DUF2722).  This
          eukaryotic family of proteins has no known function.
          Length = 374

 Score = 25.6 bits (56), Expect = 2.8
 Identities = 6/19 (31%), Positives = 11/19 (57%)

Query: 19 LALFGSSVSFFSCSENCFL 37
          L+L G +V+ +  SE   +
Sbjct: 29 LSLLGPNVTNWPYSEEALI 47


>gnl|CDD|181437 PRK08470, PRK08470, adenylosuccinate lyase; Provisional.
          Length = 442

 Score = 25.1 bits (55), Expect = 4.0
 Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 3/32 (9%)

Query: 74  KLSSSMPHGFIALLTNNIV---KIVKYFFIPS 102
           K SS+MPH    +L+ NI    ++++ F  P+
Sbjct: 260 KGSSAMPHKRNPVLSENITGLCRVIRSFATPA 291


>gnl|CDD|181064 PRK07638, PRK07638, acyl-CoA synthetase; Validated.
          Length = 487

 Score = 25.1 bits (55), Expect = 4.3
 Identities = 7/19 (36%), Positives = 11/19 (57%)

Query: 46  FFSCSESSFFSFSADSDSK 64
           F+  SE SF +   D +S+
Sbjct: 285 FYGASELSFVTALVDEESE 303


>gnl|CDD|180868 PRK07188, PRK07188, nicotinate phosphoribosyltransferase;
           Provisional.
          Length = 352

 Score = 24.1 bits (53), Expect = 7.9
 Identities = 6/21 (28%), Positives = 12/21 (57%)

Query: 78  SMPHGFIALLTNNIVKIVKYF 98
           +MPH  I +   ++V+  K +
Sbjct: 176 TMPHALIQMFNGDVVEACKAY 196


>gnl|CDD|148146 pfam06367, Drf_FH3, Diaphanous FH3 Domain.  This region is found
          in the Formin-like and and diaphanous proteins.
          Length = 197

 Score = 23.8 bits (52), Expect = 9.7
 Identities = 7/28 (25%), Positives = 12/28 (42%)

Query: 22 FGSSVSFFSCSENCFLGFSCDSITFFSC 49
          F S V     SEN  + +   ++ F + 
Sbjct: 23 FQSLVGALDSSENDNVEYKVATMQFINA 50


  Database: CddB
    Posted date:  Feb 4, 2011  9:54 PM
  Number of letters in database: 5,994,473
  Number of sequences in database:  21,608
  
Lambda     K      H
   0.333    0.141    0.454 

Gapped
Lambda     K      H
   0.267   0.0744    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 21608
Number of Hits to DB: 1,574,054
Number of extensions: 79978
Number of successful extensions: 378
Number of sequences better than 10.0: 1
Number of HSP's gapped: 377
Number of HSP's successfully gapped: 41
Length of query: 102
Length of database: 5,994,473
Length adjustment: 69
Effective length of query: 33
Effective length of database: 4,503,521
Effective search space: 148616193
Effective search space used: 148616193
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.5 bits)
S2: 50 (23.0 bits)