Query 537021.9.peg.916_1
Match_columns 46
No_of_seqs 1 out of 3
Neff 1.0
Searched_HMMs 39220
Date Wed May 25 03:53:20 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i peg_916.hhm -d /home/congqian_1/database/cdd/Cdd.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2555 consensus 35.4 9.9 0.00025 19.1 -0.1 17 6-22 530-546 (588)
2 TIGR02272 gentisate_1_2 gentis 8.8 1.5E+02 0.0039 13.6 1.0 12 30-41 321-332 (343)
3 TIGR02407 ectoine_ectB diamino 8.5 1.5E+02 0.0037 13.7 0.8 23 11-33 244-267 (413)
4 KOG1321 consensus 8.4 1.9E+02 0.0047 13.2 1.3 19 15-41 219-237 (395)
5 pfam06839 zf-GRF GRF zinc fing 7.8 2.1E+02 0.0053 12.9 1.4 17 4-20 24-46 (46)
6 PRK07106 5-aminoimidazole-4-ca 7.3 1E+02 0.0027 14.3 -0.4 14 8-21 335-348 (391)
7 PRK00881 purH bifunctional pho 7.2 1.1E+02 0.0028 14.3 -0.4 15 7-21 457-471 (514)
8 pfam07316 DUF1463 Protein of u 6.4 2.4E+02 0.006 12.7 1.0 13 11-23 8-20 (140)
9 KOG3750 consensus 6.0 2.7E+02 0.007 12.4 2.0 22 1-22 44-65 (270)
10 COG5485 Predicted ester cyclas 5.8 2.8E+02 0.0071 12.3 1.3 17 5-21 80-106 (131)
No 1
>KOG2555 consensus
Probab=35.43 E-value=9.9 Score=19.10 Aligned_cols=17 Identities=53% Similarity=0.917 Sum_probs=14.9
Q ss_pred EEECCCEEEEECCCCEE
Q ss_conf 96156504565022102
Q 537021.9.peg.9 6 FSCSKNAFFSFSDNVFN 22 (46)
Q Consensus 6 fscsknaffsfsdnvfn 22 (46)
-+|+..|||.|.|||..
T Consensus 530 v~l~SDAFFPF~Dnv~r 546 (588)
T KOG2555 530 VSLSSDAFFPFPDNVYR 546 (588)
T ss_pred CEECCCCCCCCCHHHHH
T ss_conf 44224543667157999
No 2
>TIGR02272 gentisate_1_2 gentisate 1,2-dioxygenase; InterPro: IPR011960 This family consists of gentisate 1,2-dioxygenases. This ring-opening enzyme acts in salicylate degradation that goes via gentisate rather than via catechol. It converts gentisate to maleylpyruvate. Some putative gentisate 1,2-dioxygenases may be excluded from this entry..
Probab=8.83 E-value=1.5e+02 Score=13.57 Aligned_cols=12 Identities=42% Similarity=0.595 Sum_probs=5.3
Q ss_pred CEEEEEEECCCC
Q ss_conf 404778622222
Q 537021.9.peg.9 30 SLSLFSFSAHSC 41 (46)
Q Consensus 30 slslfsfsahsc 41 (46)
..-|||||-..|
T Consensus 321 d~vlFsfSDr~v 332 (343)
T TIGR02272 321 DAVLFSFSDRPV 332 (343)
T ss_pred CEEEEECCCHHH
T ss_conf 658863167799
No 3
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase; InterPro: IPR012773 Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (2.6.1.76 from EC) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore (Q9Z3R2 from SWISSPROT) or 1,3-diaminopropane (P44951 from SWISSPROT) biosynthesis. Ectoine is a compatible solute particularly effective in conferring salt tolerance.; GO: 0030170 pyridoxal phosphate binding, 0047307 diaminobutyrate-pyruvate transaminase activity, 0019491 ectoine biosynthetic process.
Probab=8.53 E-value=1.5e+02 Score=13.66 Aligned_cols=23 Identities=39% Similarity=0.538 Sum_probs=16.3
Q ss_pred CEEEEECCC-CEEEEEEEECCEEE
Q ss_conf 504565022-10256564154047
Q 537021.9.peg.9 11 NAFFSFSDN-VFNSLVILSNSLSL 33 (46)
Q Consensus 11 naffsfsdn-vfnslvilsnslsl 33 (46)
-.||||-.- .---+|-||.|+|=
T Consensus 244 G~FFSFE~AgI~PDiVcLSKSisG 267 (413)
T TIGR02407 244 GTFFSFEPAGIEPDIVCLSKSISG 267 (413)
T ss_pred CCCCCCCCCCCCCCEEEEECCCCC
T ss_conf 896453446775661785020035
No 4
>KOG1321 consensus
Probab=8.40 E-value=1.9e+02 Score=13.18 Aligned_cols=19 Identities=53% Similarity=0.791 Sum_probs=11.7
Q ss_pred EECCCCEEEEEEEECCEEEEEEECCCC
Q ss_conf 650221025656415404778622222
Q 537021.9.peg.9 15 SFSDNVFNSLVILSNSLSLFSFSAHSC 41 (46)
Q Consensus 15 sfsdnvfnslvilsnslslfsfsahsc 41 (46)
.|.+.|-|..||+ |||||-
T Consensus 219 ~F~~~~r~~VVIl--------FSAHsl 237 (395)
T KOG1321 219 TFPEPVRDDVVIL--------FSAHSL 237 (395)
T ss_pred HCCCCCCCCEEEE--------EECCCC
T ss_conf 4687555647999--------944778
No 5
>pfam06839 zf-GRF GRF zinc finger. This presumed zinc binding domain is found in a variety of DNA-binding proteins. It seems likely that this domain is involved in nucleic acid binding. It is named GRF after three conserved residues in the centre of the alignment of the domain. This zinc finger may be related to pfam01396.
Probab=7.81 E-value=2.1e+02 Score=12.93 Aligned_cols=17 Identities=35% Similarity=0.935 Sum_probs=11.2
Q ss_pred EEEEECC------CEEEEECCCC
Q ss_conf 9996156------5045650221
Q 537021.9.peg.9 4 TFFSCSK------NAFFSFSDNV 20 (46)
Q Consensus 4 tffscsk------naffsfsdnv 20 (46)
.||.|++ =.||...|.|
T Consensus 24 ~Fy~C~~~~~~~~C~FF~W~De~ 46 (46)
T pfam06839 24 QFYKCPYGREGKGCGFFQWEDEV 46 (46)
T ss_pred EEEECCCCCCCCCCCCEEECCCC
T ss_conf 83778998888885997823349
No 6
>PRK07106 5-aminoimidazole-4-carboxamide ribonucleotide transformylase; Provisional
Probab=7.26 E-value=1e+02 Score=14.35 Aligned_cols=14 Identities=43% Similarity=0.788 Sum_probs=9.1
Q ss_pred ECCCEEEEECCCCE
Q ss_conf 15650456502210
Q 537021.9.peg.9 8 CSKNAFFSFSDNVF 21 (46)
Q Consensus 8 csknaffsfsdnvf 21 (46)
+.-.|||.|.|+|-
T Consensus 335 lASDAFFPF~D~Ie 348 (391)
T PRK07106 335 LGSDAFFPFGDNIE 348 (391)
T ss_pred EEECCCCCCCHHHH
T ss_conf 99115788756899
No 7
>PRK00881 purH bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Provisional
Probab=7.17 E-value=1.1e+02 Score=14.27 Aligned_cols=15 Identities=40% Similarity=0.647 Sum_probs=9.8
Q ss_pred EECCCEEEEECCCCE
Q ss_conf 615650456502210
Q 537021.9.peg.9 7 SCSKNAFFSFSDNVF 21 (46)
Q Consensus 7 scsknaffsfsdnvf 21 (46)
.+.-.|||.|.|++-
T Consensus 457 vlASDAFFPF~D~ie 471 (514)
T PRK00881 457 VLASDAFFPFRDGVE 471 (514)
T ss_pred EEEECCCCCCCHHHH
T ss_conf 899567788744799
No 8
>pfam07316 DUF1463 Protein of unknown function (DUF1463). This family consists of several hypothetical bacterial proteins of around 140 residues in length. Members of this family seem to be found exclusively in Borrelia burgdorferi (Lyme disease spirochete). The function of this family is unknown.
Probab=6.37 E-value=2.4e+02 Score=12.70 Aligned_cols=13 Identities=54% Similarity=1.009 Sum_probs=7.0
Q ss_pred CEEEEECCCCEEE
Q ss_conf 5045650221025
Q 537021.9.peg.9 11 NAFFSFSDNVFNS 23 (46)
Q Consensus 11 naffsfsdnvfns 23 (46)
..||||+|+...+
T Consensus 8 ~ifFS~~~~~i~s 20 (140)
T pfam07316 8 EIFFSFGDNLIDS 20 (140)
T ss_pred EEEEEECCEEEEC
T ss_conf 8999857768411
No 9
>KOG3750 consensus
Probab=5.98 E-value=2.7e+02 Score=12.39 Aligned_cols=22 Identities=27% Similarity=0.407 Sum_probs=0.0
Q ss_pred CEEEEEEECCCEEEEECCCCEE
Q ss_conf 9789996156504565022102
Q 537021.9.peg.9 1 LLVTFFSCSKNAFFSFSDNVFN 22 (46)
Q Consensus 1 llvtffscsknaffsfsdnvfn 22 (46)
.++-+++-++--++.++||++|
T Consensus 44 ~~~~~~~l~~t~Y~~~~~n~~n 65 (270)
T KOG3750 44 DLVFVYPLPHTHYLVNKDNVLN 65 (270)
T ss_pred EEEEEEECCCEEEEEECCCCHH
T ss_conf 1588840572478743233210
No 10
>COG5485 Predicted ester cyclase [General function prediction only]
Probab=5.83 E-value=2.8e+02 Score=12.35 Aligned_cols=17 Identities=41% Similarity=0.825 Sum_probs=0.0
Q ss_pred EEEECCCEEE----------EECCCCE
Q ss_conf 9961565045----------6502210
Q 537021.9.peg.9 5 FFSCSKNAFF----------SFSDNVF 21 (46)
Q Consensus 5 ffscsknaff----------sfsdnvf 21 (46)
.|+|+++.-| +||.|||
T Consensus 80 ~Fdctp~G~i~Gip~nGkrV~Fse~vf 106 (131)
T COG5485 80 TFDCTPSGEIMGIPPNGKRVRFSENVF 106 (131)
T ss_pred EECCCCCCEEECCCCCCCEEEEEHHHH
T ss_conf 974676733854478885888662302
Done!