Query 537021.9.peg.930_1
Match_columns 51
No_of_seqs 1 out of 3
Neff 1.0
Searched_HMMs 33803
Date Wed May 25 04:40:07 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i peg_930.hhm -d /home/congqian_1/database/mmdb/mmdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 >2au3_A DNA primase; zinc ribb 28.3 27 0.0008 16.9 1.4 34 7-41 11-44 (58)
2 >3fy6_A Integron cassette prot 22.1 44 0.0013 15.8 1.6 11 32-42 78-88 (117)
3 >3l32_A Phosphoprotein; antipa 10.4 93 0.0027 14.1 0.8 37 1-46 1-37 (45)
4 >2nr7_A Secretion activator pr 10.0 1.4E+02 0.0042 13.1 2.8 23 25-47 92-114 (116)
5 >2p3y_A Hypothetical protein V 9.8 1.4E+02 0.0041 13.2 1.4 13 7-19 103-115 (123)
6 >2ikb_A Hypothetical protein N 8.9 1.6E+02 0.0046 12.9 1.4 23 27-49 69-91 (98)
7 >2es4_D Lipase chaperone; prot 8.2 1.3E+02 0.0038 13.3 0.8 11 14-24 86-96 (147)
8 >3e3x_A BIPA; MCSG,PSI2, struc 6.7 51 0.0015 15.5 -1.9 11 8-18 23-33 (71)
9 >2nvp_A Hypothetical protein; 6.1 2E+02 0.0061 12.3 1.0 39 6-48 90-130 (155)
10 >2p0v_A Hypothetical protein B 5.8 2.3E+02 0.0067 12.1 1.5 39 6-48 92-132 (187)
No 1
>>2au3_A DNA primase; zinc ribbon, toprim, RNA polymerase, DNA replication, transferase; HET: DNA; 2.00A {Aquifex aeolicus} (A:350-407)
Probab=28.26 E-value=27 Score=16.90 Aligned_cols=34 Identities=38% Similarity=0.634 Sum_probs=26.3
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 66842303399999999999856677999999999
Q 537021.9.peg.9 7 NYNLDERGRFFCYFLSLLIVDTLRSFSLFQHLWLK 41 (51)
Q Consensus 7 nynldergrffcyflsllivdtlrsfslfqhlwlk 41 (51)
.-||.|..|-|-|+|.. |.|..|.|.|-....-|
T Consensus 11 renleektrefryylgf-isdgvrrfalasefhtk 44 (58)
T 2au3_A 11 RENLEEKTREFRYYLGF-ISDGVRRFALASEFHTK 44 (58)
T ss_dssp GGCHHHHHHHHHHHHTT-CCCHHHHHHHHHHHHHH
T ss_pred HHCCCCCCHHHHHHHHH-CCCHHHHHHHHHHHHHH
T ss_conf 73788578999999986-88999999999999999
No 2
>>3fy6_A Integron cassette protein; novel, oyster POND, woodshole,USA, unknown function, structural genomics, PSI-2, protein structure initiative; 2.10A {Vibrio cholerae} (A:1-117)
Probab=22.06 E-value=44 Score=15.80 Aligned_cols=11 Identities=55% Similarity=1.048 Sum_probs=8.8
Q ss_pred HHHHHHHHHHH
Q ss_conf 79999999999
Q 537021.9.peg.9 32 FSLFQHLWLKR 42 (51)
Q Consensus 32 fslfqhlwlkr 42 (51)
-.||||.||.-
T Consensus 78 qnlfqhawlew 88 (117)
T 3fy6_A 78 QNLFQHAWLEW 88 (117)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
T ss_conf 99999999999
No 3
>>3l32_A Phosphoprotein; antiparallel alpha-helices, viral protein, dimerisation domain; 1.50A {Rabies virus} (A:)
Probab=10.45 E-value=93 Score=14.09 Aligned_cols=37 Identities=35% Similarity=0.692 Sum_probs=22.9
Q ss_pred CCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9212136684230339999999999985667799999999999988
Q 537021.9.peg.9 1 MAFFFNNYNLDERGRFFCYFLSLLIVDTLRSFSLFQHLWLKRLSSI 46 (51)
Q Consensus 1 mafffnnynldergrffcyflsllivdtlrsfslfqhlwlkrlssi 46 (51)
|+..|.+| ||+-| .-||..+||=.-|-..|-.....|
T Consensus 1 ~~llfQsy-Ld~vG--------~qiVr~mksGe~F~KIWS~~veeI 37 (45)
T 3l32_A 1 MNLLFQSY-LDNVG--------VQIVRQMRSGERFLKIWSQTVEEI 37 (45)
T ss_dssp -CHHHHHH-HHHHH--------HHHHHHHTTTCCHHHHHHHHHHHH
T ss_pred CCHHHHHH-HHHHH--------HHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf 94279999-99999--------999999863562999999999999
No 4
>>2nr7_A Secretion activator protein, putative; APCC85792, structural genomics, PSI-2, protein structure initiative, MCSG; 1.30A {Porphyromonas gingivalis W83} (A:80-195)
Probab=10.01 E-value=1.4e+02 Score=13.12 Aligned_cols=23 Identities=26% Similarity=0.247 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99856677999999999999887
Q 537021.9.peg.9 25 IVDTLRSFSLFQHLWLKRLSSIL 47 (51)
Q Consensus 25 ivdtlrsfslfqhlwlkrlssil 47 (51)
.++.-+|+.-|..=|+.|..+++
T Consensus 92 ~~~~~~s~~~F~~GW~nR~~~~~ 114 (116)
T 2nr7_A 92 RELLRHTNKRFLRGWLNRLEDIR 114 (116)
T ss_dssp HHHHHHSTHHHHHHHHHHHHHGG
T ss_pred HHHCCCCHHHHHHHHHHHHHHHH
T ss_conf 54304206478688999999976
No 5
>>2p3y_A Hypothetical protein VPA0735; structural genomics, PSI-2, protein structure initiative; 1.80A {Vibrio parahaemolyticus rimd 2210633} (A:40-65,A:256-352)
Probab=9.76 E-value=1.4e+02 Score=13.18 Aligned_cols=13 Identities=38% Similarity=0.539 Sum_probs=9.8
Q ss_pred CCCHHHHHHHHHH
Q ss_conf 6684230339999
Q 537021.9.peg.9 7 NYNLDERGRFFCY 19 (51)
Q Consensus 7 nynldergrffcy 19 (51)
-++||.|..||-+
T Consensus 103 ~~~lDaR~~ffy~ 115 (123)
T 2p3y_A 103 YDELDERAAWFYE 115 (123)
T ss_dssp SBCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHH
T ss_conf 4114567899999
No 6
>>2ikb_A Hypothetical protein NMB1012; structural genomics, PSI-2, MCSG, protein structure initiative, midwest center for structural genomics; 1.70A {Neisseria meningitidis MC58} (A:70-167)
Probab=8.91 E-value=1.6e+02 Score=12.89 Aligned_cols=23 Identities=26% Similarity=0.655 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 85667799999999999988740
Q 537021.9.peg.9 27 DTLRSFSLFQHLWLKRLSSILVQ 49 (51)
Q Consensus 27 dtlrsfslfqhlwlkrlssilvq 49 (51)
..|.++.-|..=|++|..+++-+
T Consensus 69 ~~l~~~~~F~~GW~~R~~~~~~~ 91 (98)
T 2ikb_A 69 TKLGTFTSFGKGWVRRVAQNLIH 91 (98)
T ss_dssp HHHCCSSHHHHHHHHHHHHHHHH
T ss_pred HHCCCHHHHHHHHHHHHHHHHHH
T ss_conf 85674277888899999999986
No 7
>>2es4_D Lipase chaperone; protein-protein complex, steric chaperone, triacylglycerol hydrolase, all alpha helix protein, A/B hydrolase fold; 1.85A {Burkholderia glumae} (D:1-147)
Probab=8.16 E-value=1.3e+02 Score=13.33 Aligned_cols=11 Identities=36% Similarity=0.627 Sum_probs=8.7
Q ss_pred HHHHHHHHHHH
Q ss_conf 33999999999
Q 537021.9.peg.9 14 GRFFCYFLSLL 24 (51)
Q Consensus 14 grffcyflsll 24 (51)
-.||-||||-+
T Consensus 86 Rd~FDYFLSa~ 96 (147)
T 2es4_D 86 REFFDYXLTAQ 96 (147)
T ss_dssp HHHHHHHHTTG
T ss_pred HHHHHHHHHCC
T ss_conf 99999987513
No 8
>>3e3x_A BIPA; MCSG,PSI2, structural genomics, protein structure initiative, midwest center for structural genomics, GTP-binding; HET: MLZ MLY; 1.95A {Vibrio parahaemolyticus} (A:207-277)
Probab=6.73 E-value=51 Score=15.47 Aligned_cols=11 Identities=64% Similarity=1.250 Sum_probs=7.3
Q ss_pred CCHHHHHHHHH
Q ss_conf 68423033999
Q 537021.9.peg.9 8 YNLDERGRFFC 18 (51)
Q Consensus 8 ynldergrffc 18 (51)
.+|.+||+||.
T Consensus 23 ~~lq~RG~lFV 33 (71)
T 3e3x_A 23 FNLQERGRLFI 33 (71)
T ss_dssp HHHTTSEEESC
T ss_pred HHHHHHCEEEE
T ss_conf 98875311886
No 9
>>2nvp_A Hypothetical protein; alpha beta protein, structural genomics, PSI-2, protein structure initiative; 2.20A {Clostridium perfringens} (A:41-195)
Probab=6.15 E-value=2e+02 Score=12.28 Aligned_cols=39 Identities=21% Similarity=0.404 Sum_probs=26.6
Q ss_pred CCCCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 3668423033999999999--998566779999999999998874
Q 537021.9.peg.9 6 NNYNLDERGRFFCYFLSLL--IVDTLRSFSLFQHLWLKRLSSILV 48 (51)
Q Consensus 6 nnynldergrffcyflsll--ivdtlrsfslfqhlwlkrlssilv 48 (51)
-+|.+|- .|||+.|. .-..-..-+.|..-|++-+..||-
T Consensus 90 rKyEiDS----Lcypl~La~~y~~~Tgd~~~f~~~w~~A~~~il~ 130 (155)
T 2nvp_A 90 RKYEIDS----LCYPVRLIHKYWKESGDETFFNDDIKKAFNXIID 130 (155)
T ss_dssp CCCCHHH----HHHHHHHHHHHHHHHCCCSSCCHHHHHHHHHHHH
T ss_pred EEHHHHH----HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_conf 5236665----5789999999998649846660999999999999
No 10
>>2p0v_A Hypothetical protein BT3781; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacteroides thetaiotaomicron vpi-5482} (A:84-270)
Probab=5.84 E-value=2.3e+02 Score=12.06 Aligned_cols=39 Identities=26% Similarity=0.596 Sum_probs=27.4
Q ss_pred CCCCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 366842303399999999--9998566779999999999998874
Q 537021.9.peg.9 6 NNYNLDERGRFFCYFLSL--LIVDTLRSFSLFQHLWLKRLSSILV 48 (51)
Q Consensus 6 nnynldergrffcyflsl--livdtlrsfslfqhlwlkrlssilv 48 (51)
-+|.+|- .|||+.| ..-..-..-+.|..-|++-+..|+-
T Consensus 92 rKyEiDS----L~~~l~La~~y~~~Tgd~~~f~~~w~~Av~~il~ 132 (187)
T 2p0v_A 92 RKWEIDS----LCYPIRLAYHYWKTTGDASVFSDEWLQAIANVLK 132 (187)
T ss_dssp CCCCHHH----HHHHHHHHHHHHHHHCCCTTSSHHHHHHHHHHHH
T ss_pred EHHHHHH----HHHHHHHHHHHHHHHCCHHHHCHHHHHHHHHHHH
T ss_conf 2247777----6889999999999739846406899999999999
Done!