Query 537021.9.peg.937_1
Match_columns 48
No_of_seqs 1 out of 3
Neff 1.0
Searched_HMMs 13730
Date Wed May 25 03:57:52 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i peg_937.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2axti1 f.23.37.1 (I:1-35) Pho 16.0 34 0.0025 14.8 1.9 18 16-33 1-18 (35)
2 d1pnoa_ c.31.1.4 (A:) Transhyd 6.7 59 0.0043 13.7 0.4 16 32-47 143-160 (180)
3 d1d4oa_ c.31.1.4 (A:) Transhyd 6.3 66 0.0048 13.4 0.5 17 31-47 137-155 (177)
4 d1g3pa1 b.37.1.1 (A:1-65) N-te 5.0 29 0.0021 15.2 -1.9 14 2-15 9-22 (65)
5 d1jr8a_ a.24.15.1 (A:) Thiol o 3.1 1.7E+02 0.012 11.3 0.7 12 30-41 16-27 (105)
6 d2bi6h1 g.3.12.1 (H:8-31) Brom 2.9 1.4E+02 0.01 11.8 0.0 13 34-46 1-13 (26)
7 d1rutx4 g.39.1.3 (X:114-146) L 2.1 2.3E+02 0.017 10.6 0.6 12 37-48 17-28 (33)
8 d2dasa1 g.39.1.17 (A:8-56) Zin 2.1 2.4E+02 0.017 10.6 0.4 4 42-45 38-41 (49)
9 d2if6a1 d.3.1.21 (A:19-200) Hy 2.0 2.1E+02 0.015 10.9 -0.1 8 39-46 105-112 (182)
10 d2epqa1 g.37.1.1 (A:380-411) P 1.8 2.5E+02 0.018 10.5 0.1 8 10-17 13-20 (32)
No 1
>d2axti1 f.23.37.1 (I:1-35) Photosystem II reaction center protein I, PsbI {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=16.02 E-value=34 Score=14.84 Aligned_cols=18 Identities=33% Similarity=0.521 Sum_probs=15.2
Q ss_pred HHHHHHHHHHHHHHHHHC
Q ss_conf 367799999999998500
Q 537021.9.peg.9 16 MSTLHLFILIKVILFHSM 33 (48)
Q Consensus 16 mstlhlfilikvilfhsm 33 (48)
|-||.++..+-|+.|-|.
T Consensus 1 MltLKi~Vy~vV~fFv~l 18 (35)
T d2axti1 1 METLKITVYIVVTFFVLL 18 (35)
T ss_dssp CCHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEHHHHHHHHHHH
T ss_conf 923887416689999999
No 2
>d1pnoa_ c.31.1.4 (A:) Transhydrogenase domain III (dIII) {Rhodospirillum rubrum [TaxId: 1085]}
Probab=6.74 E-value=59 Score=13.66 Aligned_cols=16 Identities=44% Similarity=0.854 Sum_probs=10.2
Q ss_pred HC-CHHH-CCCCEECCCC
Q ss_conf 00-0010-0585112347
Q 537021.9.peg.9 32 SM-TGYY-IDNPLFCSEK 47 (48)
Q Consensus 32 sm-tgyy-idnplfcsek 47 (48)
|| +||- ||||||-.++
T Consensus 143 sm~~GyaGv~NpLF~~~n 160 (180)
T d1pnoa_ 143 SMASGYAGVENELFFRNN 160 (180)
T ss_dssp SSCCCTTCCCCGGGTSTT
T ss_pred CCCCCCCCCCCCCEECCC
T ss_conf 766786889776257387
No 3
>d1d4oa_ c.31.1.4 (A:) Transhydrogenase domain III (dIII) {Cow (Bos taurus) [TaxId: 9913]}
Probab=6.28 E-value=66 Score=13.42 Aligned_cols=17 Identities=41% Similarity=0.894 Sum_probs=10.8
Q ss_pred HHCC-HH-HCCCCEECCCC
Q ss_conf 5000-01-00585112347
Q 537021.9.peg.9 31 HSMT-GY-YIDNPLFCSEK 47 (48)
Q Consensus 31 hsmt-gy-yidnplfcsek 47 (48)
.||. || -||||||-.++
T Consensus 137 Rsm~~GyaGv~NpLF~~~n 155 (177)
T d1d4oa_ 137 RSLGVGYAAVDNPIFYKPN 155 (177)
T ss_dssp SSSCCCTTCCCCGGGGSTT
T ss_pred CCCCCCCCCCCCCCEECCC
T ss_conf 7787886677672144487
No 4
>d1g3pa1 b.37.1.1 (A:1-65) N-terminal domains of the minor coat protein g3p {Bacteriophage M13 [TaxId: 10870]}
Probab=5.05 E-value=29 Score=15.19 Aligned_cols=14 Identities=29% Similarity=0.318 Sum_probs=11.2
Q ss_pred CHHHHHHHHCCCCH
Q ss_conf 46677676417001
Q 537021.9.peg.9 2 SKSILDGFFSNKSR 15 (48)
Q Consensus 2 sksildgffsnksr 15 (48)
+|+-+||-|+|-.+
T Consensus 9 aKp~~eGsfsnv~k 22 (65)
T d1g3pa1 9 AKSHTENSFTNVWK 22 (65)
T ss_dssp TSCCEEEEEESCEE
T ss_pred CCCCCCCCCCCEEE
T ss_conf 38754563013010
No 5
>d1jr8a_ a.24.15.1 (A:) Thiol oxidase Erv2p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=3.10 E-value=1.7e+02 Score=11.31 Aligned_cols=12 Identities=33% Similarity=0.844 Sum_probs=4.7
Q ss_pred HHHCCHHHCCCC
Q ss_conf 850000100585
Q 537021.9.peg.9 30 FHSMTGYYIDNP 41 (48)
Q Consensus 30 fhsmtgyyidnp 41 (48)
+|+++-.|-++|
T Consensus 16 lHtia~~yp~~p 27 (105)
T d1jr8a_ 16 FHTLLARFPDEP 27 (105)
T ss_dssp HHHHHHTSCSSC
T ss_pred HHHHHHHCCCCC
T ss_conf 999997788998
No 6
>d2bi6h1 g.3.12.1 (H:8-31) Bromelain inhibitor VI (cysteine protease inhibitor) {Pineapple (Ananas comosus) [TaxId: 4615]}
Probab=2.91 E-value=1.4e+02 Score=11.77 Aligned_cols=13 Identities=46% Similarity=0.802 Sum_probs=8.8
Q ss_pred CHHHCCCCEECCC
Q ss_conf 0010058511234
Q 537021.9.peg.9 34 TGYYIDNPLFCSE 46 (48)
Q Consensus 34 tgyyidnplfcse 46 (48)
|.-|-|-|-||..
T Consensus 1 tdtysdcpgfckt 13 (26)
T d2bi6h1 1 TDTYSDCPGFCKT 13 (26)
T ss_dssp CCCCSSCCTTCSS
T ss_pred CCCCCCCCHHHHH
T ss_conf 9752458348889
No 7
>d1rutx4 g.39.1.3 (X:114-146) LIM only 4 (Lmo4) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=2.13 E-value=2.3e+02 Score=10.64 Aligned_cols=12 Identities=50% Similarity=1.196 Sum_probs=0.0
Q ss_pred HCCCCEECCCCC
Q ss_conf 005851123479
Q 537021.9.peg.9 37 YIDNPLFCSEKR 48 (48)
Q Consensus 37 yidnplfcsekr 48 (48)
|+...+||...|
T Consensus 17 yvNG~lfCE~D~ 28 (33)
T d1rutx4 17 YINGSLFCEHDR 28 (33)
T ss_dssp EETTEEEEGGGC
T ss_pred EECCEEEEECCC
T ss_conf 856779873588
No 8
>d2dasa1 g.39.1.17 (A:8-56) Zinc finger MYM-type protein 5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=2.06 E-value=2.4e+02 Score=10.58 Aligned_cols=4 Identities=100% Similarity=2.053 Sum_probs=0.0
Q ss_pred EECC
Q ss_conf 1123
Q 537021.9.peg.9 42 LFCS 45 (48)
Q Consensus 42 lfcs 45 (48)
||||
T Consensus 38 LFCS 41 (49)
T d2dasa1 38 LFCS 41 (49)
T ss_dssp EESS
T ss_pred EEEC
T ss_conf 4676
No 9
>d2if6a1 d.3.1.21 (A:19-200) Hypothetical protein YiiX {Escherichia coli [TaxId: 562]}
Probab=2.00 E-value=2.1e+02 Score=10.88 Aligned_cols=8 Identities=50% Similarity=1.115 Sum_probs=0.0
Q ss_pred CCCEECCC
Q ss_conf 58511234
Q 537021.9.peg.9 39 DNPLFCSE 46 (48)
Q Consensus 39 dnplfcse 46 (48)
++..||||
T Consensus 105 ~~~~yCSe 112 (182)
T d2if6a1 105 DDRQYCSE 112 (182)
T ss_dssp SSSBCHHH
T ss_pred CCCEEHHH
T ss_conf 77377799
No 10
>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=1.83 E-value=2.5e+02 Score=10.47 Aligned_cols=8 Identities=63% Similarity=0.929 Sum_probs=0.0
Q ss_pred HCCCCHHH
Q ss_conf 41700136
Q 537021.9.peg.9 10 FSNKSRMS 17 (48)
Q Consensus 10 fsnksrms 17 (48)
|..|.||+
T Consensus 13 fkrkdrms 20 (32)
T d2epqa1 13 FKRKDRMS 20 (32)
T ss_dssp CSCHHHHH
T ss_pred HHCCCCCE
T ss_conf 51222224
Done!