RPS-BLAST 2.2.22 [Sep-27-2009]

Database: CddB 
           21,608 sequences; 5,994,473 total letters

Searching..................................................done

Query= 537021.9.peg.937_1
         (48 letters)



>gnl|CDD|185667 PTZ00489, PTZ00489, glutamate 5-kinase; Provisional.
          Length = 264

 Score = 26.1 bits (57), Expect = 2.3
 Identities = 11/41 (26%), Positives = 21/41 (51%), Gaps = 2/41 (4%)

Query: 10  FSNKSRMSTL--HLFILIKVILFHSMTGYYIDNPLFCSEKR 48
           F +  R+S L  H F    +++   + GYY +NP   ++ +
Sbjct: 146 FGDNDRLSALVAHHFKADLLVILSDIDGYYTENPRTSTDAK 186


  Database: CddB
    Posted date:  Feb 4, 2011  9:54 PM
  Number of letters in database: 5,994,473
  Number of sequences in database:  21,608
  
Lambda     K      H
   0.331    0.143    0.423 

Gapped
Lambda     K      H
   0.267   0.0555    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 21608
Number of Hits to DB: 722,375
Number of extensions: 26899
Number of successful extensions: 71
Number of sequences better than 10.0: 1
Number of HSP's gapped: 71
Number of HSP's successfully gapped: 4
Length of query: 48
Length of database: 5,994,473
Length adjustment: 21
Effective length of query: 27
Effective length of database: 5,540,705
Effective search space: 149599035
Effective search space used: 149599035
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 50 (23.4 bits)