Query         537021.9.peg.942_1
Match_columns 50
No_of_seqs    1 out of 3
Neff          1.0 
Searched_HMMs 13730
Date          Wed May 25 03:35:33 2011
Command       /home/congqian_1/programs/hhpred/hhsearch -i peg_942.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1gg3a2 b.55.1.5 (A:188-279) E  19.4      17  0.0012   16.1   0.9   13   15-27     77-89  (92)
  2 d1h4ra2 b.55.1.5 (A:215-313) M   7.8      60  0.0044   13.1   0.9   13   15-27     79-91  (99)
  3 d1ef1a2 b.55.1.5 (A:199-297) M   7.7      62  0.0045   13.1   0.9   12   16-27     80-91  (99)
  4 d2euca1 a.249.1.1 (A:1-113) Hy   4.8      56  0.0041   13.3  -0.6   15   28-43     76-90  (113)
  5 d1gm5a3 c.37.1.19 (A:286-549)    2.1 2.2E+02   0.016   10.2   0.7   22   28-49     75-96  (264)
  6 d1ubdc1 g.37.1.1 (C:295-322) Y   1.7 2.6E+02   0.019    9.8   0.8   10    7-16     12-21  (28)
  7 d1cf7b_ a.4.5.17 (B:) Cell cyc   1.7 2.7E+02    0.02    9.8   0.8    5   15-19     53-57  (82)
  8 d2cqna1 a.159.2.1 (A:743-806)    1.6 2.8E+02    0.02    9.7   1.2    7   14-20     46-52  (64)
  9 d1u9pa1 a.43.1.1 (A:72-107) Ar   1.5 2.9E+02   0.021    9.5   0.4   20    6-25      5-24  (36)
 10 d1jv2b3 d.200.1.1 (B:606-690)    1.4 3.2E+02   0.023    9.4   0.0    6   19-24      6-11  (85)

No 1  
>d1gg3a2 b.55.1.5 (A:188-279) Erythroid membrane protein 4.1R {Human (Homo sapiens) [TaxId: 9606]}
Probab=19.40  E-value=17  Score=16.06  Aligned_cols=13  Identities=38%  Similarity=0.876  Sum_probs=9.9

Q ss_pred             HHHHHHHHHCCCC
Q ss_conf             8999999621210
Q 537021.9.peg.9   15 RKRVYKSCVEQNE   27 (50)
Q Consensus        15 rkrvykscveqne   27 (50)
                      -|++++.|+||..
T Consensus        77 aK~lwk~cve~H~   89 (92)
T d1gg3a2          77 AKKLWKVCVEHHT   89 (92)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
T ss_conf             9999999997551


No 2  
>d1h4ra2 b.55.1.5 (A:215-313) Merlin {Human (Homo sapiens) [TaxId: 9606]}
Probab=7.84  E-value=60  Score=13.15  Aligned_cols=13  Identities=15%  Similarity=0.570  Sum_probs=10.0

Q ss_pred             HHHHHHHHHCCCC
Q ss_conf             8999999621210
Q 537021.9.peg.9   15 RKRVYKSCVEQNE   27 (50)
Q Consensus        15 rkrvykscveqne   27 (50)
                      -|++++.|+||..
T Consensus        79 aK~lw~~c~e~H~   91 (99)
T d1h4ra2          79 NKLILQLCIGNHD   91 (99)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
T ss_conf             9999999999889


No 3  
>d1ef1a2 b.55.1.5 (A:199-297) Moesin {Human (Homo sapiens) [TaxId: 9606]}
Probab=7.65  E-value=62  Score=13.08  Aligned_cols=12  Identities=33%  Similarity=0.731  Sum_probs=10.0

Q ss_pred             HHHHHHHHCCCC
Q ss_conf             999999621210
Q 537021.9.peg.9   16 KRVYKSCVEQNE   27 (50)
Q Consensus        16 krvykscveqne   27 (50)
                      |.++++|+||..
T Consensus        80 k~lw~~c~e~H~   91 (99)
T d1ef1a2          80 KRILALCMGNHE   91 (99)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
T ss_conf             999999999989


No 4  
>d2euca1 a.249.1.1 (A:1-113) Hypothetical protein YfmB {Bacillus subtilis [TaxId: 1423]}
Probab=4.78  E-value=56  Score=13.30  Aligned_cols=15  Identities=53%  Similarity=0.846  Sum_probs=9.0

Q ss_pred             EEEEEECCHHHHHHHH
Q ss_conf             2012215224789999
Q 537021.9.peg.9   28 VLLTLLPFPLTAQMLS   43 (50)
Q Consensus        28 vlltllpfpltaqmls   43 (50)
                      -|.+|+|| .|+.|+.
T Consensus        76 YL~~L~p~-vT~DM~~   90 (113)
T d2euca1          76 YLSTLLPY-VTADMFE   90 (113)
T ss_dssp             HHHHHGGG-CCHHHHH
T ss_pred             HHHHHHHH-HHHHHHH
T ss_conf             99999899-8999999


No 5  
>d1gm5a3 c.37.1.19 (A:286-549) RecG helicase domain {Thermotoga maritima [TaxId: 2336]}
Probab=2.05  E-value=2.2e+02  Score=10.23  Aligned_cols=22  Identities=27%  Similarity=0.285  Sum_probs=14.4

Q ss_pred             EEEEEECCHHHHHHHHHHHHHH
Q ss_conf             2012215224789999998762
Q 537021.9.peg.9   28 VLLTLLPFPLTAQMLSIIDCIY   49 (50)
Q Consensus        28 vlltllpfpltaqmlsiidciy   49 (50)
                      -...-|||.||..-...+.-|+
T Consensus        75 ~f~~~LPFeLT~~Q~~ai~ei~   96 (264)
T d1gm5a3          75 EFIKSLPFKLTNAQKRAHQEIR   96 (264)
T ss_dssp             HHHHHSSSCCCHHHHHHHHHHH
T ss_pred             HHHHHCCCCCCCHHHHHHHHHH
T ss_conf             9884004667803788899999


No 6  
>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}
Probab=1.68  E-value=2.6e+02  Score=9.80  Aligned_cols=10  Identities=50%  Similarity=0.727  Sum_probs=4.0

Q ss_pred             HHHHHHHHHH
Q ss_conf             8999887789
Q 537021.9.peg.9    7 MFRKVACERK   16 (50)
Q Consensus         7 mfrkvacerk   16 (50)
                      |||.-+.-||
T Consensus        12 ~Frd~saMRK   21 (28)
T d1ubdc1          12 MFRDNSAMRK   21 (28)
T ss_dssp             EESSHHHHHH
T ss_pred             HHHCHHHHHH
T ss_conf             8203099998


No 7  
>d1cf7b_ a.4.5.17 (B:) Cell cycle transcription factor DP-2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=1.65  E-value=2.7e+02  Score=9.76  Aligned_cols=5  Identities=80%  Similarity=1.550  Sum_probs=0.0

Q ss_pred             HHHHH
Q ss_conf             89999
Q 537021.9.peg.9   15 RKRVY   19 (50)
Q Consensus        15 rkrvy   19 (50)
                      |.|||
T Consensus        53 RRRVY   57 (82)
T d1cf7b_          53 RRRVY   57 (82)
T ss_dssp             HHHHH
T ss_pred             HHHHH
T ss_conf             68999


No 8  
>d2cqna1 a.159.2.1 (A:743-806) Hypa/FBP11 {Human (Homo sapiens) [TaxId: 9606]}
Probab=1.59  E-value=2.8e+02  Score=9.66  Aligned_cols=7  Identities=71%  Similarity=1.312  Sum_probs=0.0

Q ss_pred             HHHHHHH
Q ss_conf             7899999
Q 537021.9.peg.9   14 ERKRVYK   20 (50)
Q Consensus        14 erkrvyk   20 (50)
                      ||.|.||
T Consensus        46 ERiRiFk   52 (64)
T d2cqna1          46 ERKRIFK   52 (64)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
T ss_conf             9999999


No 9  
>d1u9pa1 a.43.1.1 (A:72-107) Arc repressor {Salmonella bacteriophage P22 [TaxId: 10754]}
Probab=1.52  E-value=2.9e+02  Score=9.55  Aligned_cols=20  Identities=40%  Similarity=0.378  Sum_probs=0.0

Q ss_pred             HHHHHHHHHHHHHHHHHHCC
Q ss_conf             78999887789999996212
Q 537021.9.peg.9    6 SMFRKVACERKRVYKSCVEQ   25 (50)
Q Consensus         6 smfrkvacerkrvykscveq   25 (50)
                      ...||||-|..|--.|-.-|
T Consensus         5 dlvrkvaeeng~s~ns~iy~   24 (36)
T d1u9pa1           5 DLVRKVAEENGRSVNSEIYQ   24 (36)
T ss_dssp             HHHHHHHHHHTCCHHHHHHH
T ss_pred             HHHHHHHHHCCCCHHHHHHH
T ss_conf             99999999828614199999


No 10 
>d1jv2b3 d.200.1.1 (B:606-690) Integrin beta tail domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=1.43  E-value=3.2e+02  Score=9.38  Aligned_cols=6  Identities=67%  Similarity=1.099  Sum_probs=0.0

Q ss_pred             HHHHHC
Q ss_conf             999621
Q 537021.9.peg.9   19 YKSCVE   24 (50)
Q Consensus        19 ykscve   24 (50)
                      +|+|||
T Consensus         6 ~k~CVe   11 (85)
T d1jv2b3           6 KKECVE   11 (85)
T ss_dssp             SHHHHT
T ss_pred             CCCCEE
T ss_conf             887238


Done!