Query 537021.9.peg.942_1 Match_columns 50 No_of_seqs 1 out of 3 Neff 1.0 Searched_HMMs 13730 Date Wed May 25 03:35:33 2011 Command /home/congqian_1/programs/hhpred/hhsearch -i peg_942.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 d1gg3a2 b.55.1.5 (A:188-279) E 19.4 17 0.0012 16.1 0.9 13 15-27 77-89 (92) 2 d1h4ra2 b.55.1.5 (A:215-313) M 7.8 60 0.0044 13.1 0.9 13 15-27 79-91 (99) 3 d1ef1a2 b.55.1.5 (A:199-297) M 7.7 62 0.0045 13.1 0.9 12 16-27 80-91 (99) 4 d2euca1 a.249.1.1 (A:1-113) Hy 4.8 56 0.0041 13.3 -0.6 15 28-43 76-90 (113) 5 d1gm5a3 c.37.1.19 (A:286-549) 2.1 2.2E+02 0.016 10.2 0.7 22 28-49 75-96 (264) 6 d1ubdc1 g.37.1.1 (C:295-322) Y 1.7 2.6E+02 0.019 9.8 0.8 10 7-16 12-21 (28) 7 d1cf7b_ a.4.5.17 (B:) Cell cyc 1.7 2.7E+02 0.02 9.8 0.8 5 15-19 53-57 (82) 8 d2cqna1 a.159.2.1 (A:743-806) 1.6 2.8E+02 0.02 9.7 1.2 7 14-20 46-52 (64) 9 d1u9pa1 a.43.1.1 (A:72-107) Ar 1.5 2.9E+02 0.021 9.5 0.4 20 6-25 5-24 (36) 10 d1jv2b3 d.200.1.1 (B:606-690) 1.4 3.2E+02 0.023 9.4 0.0 6 19-24 6-11 (85) No 1 >d1gg3a2 b.55.1.5 (A:188-279) Erythroid membrane protein 4.1R {Human (Homo sapiens) [TaxId: 9606]} Probab=19.40 E-value=17 Score=16.06 Aligned_cols=13 Identities=38% Similarity=0.876 Sum_probs=9.9 Q ss_pred HHHHHHHHHCCCC Q ss_conf 8999999621210 Q 537021.9.peg.9 15 RKRVYKSCVEQNE 27 (50) Q Consensus 15 rkrvykscveqne 27 (50) -|++++.|+||.. T Consensus 77 aK~lwk~cve~H~ 89 (92) T d1gg3a2 77 AKKLWKVCVEHHT 89 (92) T ss_dssp HHHHHHHHHHHHH T ss_pred HHHHHHHHHHHHH T ss_conf 9999999997551 No 2 >d1h4ra2 b.55.1.5 (A:215-313) Merlin {Human (Homo sapiens) [TaxId: 9606]} Probab=7.84 E-value=60 Score=13.15 Aligned_cols=13 Identities=15% Similarity=0.570 Sum_probs=10.0 Q ss_pred HHHHHHHHHCCCC Q ss_conf 8999999621210 Q 537021.9.peg.9 15 RKRVYKSCVEQNE 27 (50) Q Consensus 15 rkrvykscveqne 27 (50) -|++++.|+||.. T Consensus 79 aK~lw~~c~e~H~ 91 (99) T d1h4ra2 79 NKLILQLCIGNHD 91 (99) T ss_dssp HHHHHHHHHHHHH T ss_pred HHHHHHHHHHHHH T ss_conf 9999999999889 No 3 >d1ef1a2 b.55.1.5 (A:199-297) Moesin {Human (Homo sapiens) [TaxId: 9606]} Probab=7.65 E-value=62 Score=13.08 Aligned_cols=12 Identities=33% Similarity=0.731 Sum_probs=10.0 Q ss_pred HHHHHHHHCCCC Q ss_conf 999999621210 Q 537021.9.peg.9 16 KRVYKSCVEQNE 27 (50) Q Consensus 16 krvykscveqne 27 (50) |.++++|+||.. T Consensus 80 k~lw~~c~e~H~ 91 (99) T d1ef1a2 80 KRILALCMGNHE 91 (99) T ss_dssp HHHHHHHHHHHH T ss_pred HHHHHHHHHHHH T ss_conf 999999999989 No 4 >d2euca1 a.249.1.1 (A:1-113) Hypothetical protein YfmB {Bacillus subtilis [TaxId: 1423]} Probab=4.78 E-value=56 Score=13.30 Aligned_cols=15 Identities=53% Similarity=0.846 Sum_probs=9.0 Q ss_pred EEEEEECCHHHHHHHH Q ss_conf 2012215224789999 Q 537021.9.peg.9 28 VLLTLLPFPLTAQMLS 43 (50) Q Consensus 28 vlltllpfpltaqmls 43 (50) -|.+|+|| .|+.|+. T Consensus 76 YL~~L~p~-vT~DM~~ 90 (113) T d2euca1 76 YLSTLLPY-VTADMFE 90 (113) T ss_dssp HHHHHGGG-CCHHHHH T ss_pred HHHHHHHH-HHHHHHH T ss_conf 99999899-8999999 No 5 >d1gm5a3 c.37.1.19 (A:286-549) RecG helicase domain {Thermotoga maritima [TaxId: 2336]} Probab=2.05 E-value=2.2e+02 Score=10.23 Aligned_cols=22 Identities=27% Similarity=0.285 Sum_probs=14.4 Q ss_pred EEEEEECCHHHHHHHHHHHHHH Q ss_conf 2012215224789999998762 Q 537021.9.peg.9 28 VLLTLLPFPLTAQMLSIIDCIY 49 (50) Q Consensus 28 vlltllpfpltaqmlsiidciy 49 (50) -...-|||.||..-...+.-|+ T Consensus 75 ~f~~~LPFeLT~~Q~~ai~ei~ 96 (264) T d1gm5a3 75 EFIKSLPFKLTNAQKRAHQEIR 96 (264) T ss_dssp HHHHHSSSCCCHHHHHHHHHHH T ss_pred HHHHHCCCCCCCHHHHHHHHHH T ss_conf 9884004667803788899999 No 6 >d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Probab=1.68 E-value=2.6e+02 Score=9.80 Aligned_cols=10 Identities=50% Similarity=0.727 Sum_probs=4.0 Q ss_pred HHHHHHHHHH Q ss_conf 8999887789 Q 537021.9.peg.9 7 MFRKVACERK 16 (50) Q Consensus 7 mfrkvacerk 16 (50) |||.-+.-|| T Consensus 12 ~Frd~saMRK 21 (28) T d1ubdc1 12 MFRDNSAMRK 21 (28) T ss_dssp EESSHHHHHH T ss_pred HHHCHHHHHH T ss_conf 8203099998 No 7 >d1cf7b_ a.4.5.17 (B:) Cell cycle transcription factor DP-2 {Human (Homo sapiens) [TaxId: 9606]} Probab=1.65 E-value=2.7e+02 Score=9.76 Aligned_cols=5 Identities=80% Similarity=1.550 Sum_probs=0.0 Q ss_pred HHHHH Q ss_conf 89999 Q 537021.9.peg.9 15 RKRVY 19 (50) Q Consensus 15 rkrvy 19 (50) |.||| T Consensus 53 RRRVY 57 (82) T d1cf7b_ 53 RRRVY 57 (82) T ss_dssp HHHHH T ss_pred HHHHH T ss_conf 68999 No 8 >d2cqna1 a.159.2.1 (A:743-806) Hypa/FBP11 {Human (Homo sapiens) [TaxId: 9606]} Probab=1.59 E-value=2.8e+02 Score=9.66 Aligned_cols=7 Identities=71% Similarity=1.312 Sum_probs=0.0 Q ss_pred HHHHHHH Q ss_conf 7899999 Q 537021.9.peg.9 14 ERKRVYK 20 (50) Q Consensus 14 erkrvyk 20 (50) ||.|.|| T Consensus 46 ERiRiFk 52 (64) T d2cqna1 46 ERKRIFK 52 (64) T ss_dssp HHHHHHH T ss_pred HHHHHHH T ss_conf 9999999 No 9 >d1u9pa1 a.43.1.1 (A:72-107) Arc repressor {Salmonella bacteriophage P22 [TaxId: 10754]} Probab=1.52 E-value=2.9e+02 Score=9.55 Aligned_cols=20 Identities=40% Similarity=0.378 Sum_probs=0.0 Q ss_pred HHHHHHHHHHHHHHHHHHCC Q ss_conf 78999887789999996212 Q 537021.9.peg.9 6 SMFRKVACERKRVYKSCVEQ 25 (50) Q Consensus 6 smfrkvacerkrvykscveq 25 (50) ...||||-|..|--.|-.-| T Consensus 5 dlvrkvaeeng~s~ns~iy~ 24 (36) T d1u9pa1 5 DLVRKVAEENGRSVNSEIYQ 24 (36) T ss_dssp HHHHHHHHHHTCCHHHHHHH T ss_pred HHHHHHHHHCCCCHHHHHHH T ss_conf 99999999828614199999 No 10 >d1jv2b3 d.200.1.1 (B:606-690) Integrin beta tail domain {Human (Homo sapiens) [TaxId: 9606]} Probab=1.43 E-value=3.2e+02 Score=9.38 Aligned_cols=6 Identities=67% Similarity=1.099 Sum_probs=0.0 Q ss_pred HHHHHC Q ss_conf 999621 Q 537021.9.peg.9 19 YKSCVE 24 (50) Q Consensus 19 ykscve 24 (50) +|+||| T Consensus 6 ~k~CVe 11 (85) T d1jv2b3 6 KKECVE 11 (85) T ss_dssp SHHHHT T ss_pred CCCCEE T ss_conf 887238 Done!